RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Aste1Q8BIR2 672 aa16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pcdha9Q91Y11 979 aa16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pde6cQ91ZQ1 861 aa16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Afg3l1Q920A7 789 aaKnown RBP16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Cpxm2Q9D2L5 764 aa16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Baiap2l1Q9DBJ3 514 aa16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rfx5Q9JL61 658 aa16.43■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Anxa5P48036 319 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Abcd1P48410 736 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Mcm4P49717 862 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Upf3bQ3ULL6 472 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Oca2Q62052 833 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Traf3ip3Q8C0G2 513 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Tgif2Q8C0Y1 237 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Zc3h3Q8CHP0 950 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pcdha11Q91Y19 950 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Tmem132aQ922P8 1018 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 ArskQ9D2L1 553 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 CntrlA2AL36 2334 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Col12a1Q60847 3120 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rtl9Q32KG4 1339 aa16.42■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rap1gapA2ALS5 663 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Ugt1a8D3Z748 530 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Gm8298J3QPI0 401 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 AlyrefO08583 255 aaKnown RBP16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Ddx6P54823 483 aaKnown RBP16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 G2e3Q5RJY2 716 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pik3r5Q5SW28 871 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Lats2Q7TSJ6 1042 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Armcx3Q8BHS6 379 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 B130006D01RikQ8BRH6 153 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Tmem87aQ8BXN9 555 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Setdb2Q8C267 713 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 NelfbQ8C4Y3 580 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Lancl3Q8CD19 420 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Myt1Q8CFC2 1127 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Bbs7Q8K2G4 715 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rassf9Q8K342 435 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 NeproQ8R2U2 564 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Zdhhc7Q91WU6 308 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Ophn1Q99J31 802 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Tab2Q99K90 693 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Dusp10Q9ESS0 483 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Timp4Q9JHB3 224 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 C1qtnf1Q9QXP7 281 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 NumbQ9QZS3 653 aa16.41■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 1700031M16RikA0A087WSH0 82 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Zfand4D3Z3C6 739 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 4930544D05RikJ3QK56 214 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pak1O88643 545 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Tcf3P15806 651 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Serpinc1P32261 465 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Stat4P42228 749 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rrp1P56183 494 aaKnown RBP16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Ybx1P62960 322 aaKnown RBP16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Ppp3caP63328 521 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Acot6Q32Q92 419 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Olfr8Q60892 310 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Krt31Q61765 416 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rbm12b2Q66JV4 834 aaKnown RBP16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Adat2Q6P6J0 191 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Defb34Q7TNV8 81 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Wdr3Q8BHB4 942 aaKnown RBP16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 AgmoQ8BS35 447 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Slc7a14Q8BXR1 771 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Traf3ip2Q8N7N6 555 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Nol6Q8R5K4 1152 aaKnown RBP16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Tm4sf5Q91XF2 196 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pcdhb15Q91Y04 786 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Socs4Q91ZA6 436 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 MlklQ9D2Y4 472 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 1700123K08RikQ9D991 295 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Rnf138rt1Q9D9M9 248 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Clcn5Q9WVD4 746 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Atp12aQ9Z1W8 1035 aa16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Knop1Q9Z2Q2 478 aaKnown RBP16.4■□□□□ 0.22
Hmgb1-208ENSMUST00000139443 Pcmtd1P59913 357 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cdh8P97291 799 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Grm2Q14BI2 872 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Aarsd1Q3THG9 412 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Pik3r6Q3U6Q4 756 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Ccdc61Q3UJV1 511 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Runx3Q64131 409 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Olfr212Q7TS33 327 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Vtcn1Q7TSP5 283 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Acad9Q8JZN5 625 aaKnown RBP16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Rell1Q8K2J7 272 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Dnttip2Q8R2M2 758 aaKnown RBP16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Olfr1499Q8VG65 314 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Sh3d19Q91X43 789 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 HgsQ99LI8 775 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Cxxc1Q9CWW7 660 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Kif12Q9D2Z8 642 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Ccdc89Q9DA73 370 aa16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Dnajb1Q9QYJ3 340 aaKnown RBP16.39■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Myh10Q61879 1976 aaKnown RBP16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Lrrc37aB1AWG4 3215 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Col27a1Q5QNQ9 1845 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Gm5485A0A1D5RM98 91 aa16.38■□□□□ 0.21
Hmgb1-208ENSMUST00000139443 Magea10A2AMW4 325 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 113.5 ms