RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Zdhhc3Q8R173 299 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Kcnq4Q9JK97 696 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm3415J3QMS8 315 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Cyp2c39P56656 490 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Psmc1P62192 440 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mysm1Q69Z66 819 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ppfia2Q8BSS9 1257 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Abcf2Q99LE6 628 aaKnown RBP16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm3404Q9D506 307 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Trpm5Q9JJH7 1158 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ms4a14A0A087WSD2 1232 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 IqccA2ADZ8 418 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Nr2c2P49117 596 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Znf865Q3U3I9 1058 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Arhgap44Q5SSM3 814 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Foxn1Q61575 648 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Impg2Q80XH2 1243 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 4933409G03RikQ8C5U0 320 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Q9CQC3 228 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Fam212aQ9CX62 282 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 ParvaQ9EPC1 372 aa16.73■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ankrd16A2AS55 361 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mmrn1B2RPV6 1210 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 C2cd2E9Q3C1 696 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Krt19P19001 403 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mxi1P50540 228 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Slc12a1P55014 1095 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 MagohP61327 146 aaKnown RBP16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 RetsatQ64FW2 609 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 March4Q80TE3 409 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Bank1Q80VH0 783 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Rassf2Q8BMS9 326 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Rccd1Q8BTU7 377 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Slc9a4Q8BUE1 797 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Fam118bQ8C569 351 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Cfap36Q8C6E0 343 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 H2-Q4Q8HWB2 354 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Trpv6Q91WD2 767 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 MagohbQ9CQL1 146 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Bbs5Q9CZQ9 341 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pramef12Q9D2F1 463 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 6030498E09RikB1AX85 169 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Kpna6O35345 536 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Clcn6O35454 870 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 JchainP01592 159 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ano7Q14AT5 859 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 PighQ5M9N4 188 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tsga10Q6NY15 697 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Nim1kQ8BHI9 436 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ppm1kQ8BXN7 372 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 UvragQ8K245 698 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Snrnp25Q8VIK1 123 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Hsf3D0VYS2 492 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Apol11aE9PZG0 334 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Top6blJ3QMY9 579 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm3138K7N754 218 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ptk2P34152 1090 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ect2Q07139 913 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Zscan2Q07230 614 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Adam39Q7M762 756 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Cnot10Q8BH15 744 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 VasnQ9CZT5 673 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mms19Q9D071 1031 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Satl1Q9D5N8 744 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Rab27aQ9ERI2 221 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Klrc2Q9WTJ9 238 aa16.72■□□□□ 0.27
Trim39-203ENSMUST00000113706 Lipo2D3YY49 398 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm5926E9PWJ8 236 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Vmn2r17E9PYF5 849 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tspyl1O88852 379 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tars2Q3UQ84 723 aaKnown RBP16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Q3UTZ3 580 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ppp2r2aQ6P1F6 447 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tcaf3Q6QR59 914 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 HpseQ6YGZ1 535 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Dpp3Q99KK7 738 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 TtpalQ9D3D0 343 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Leng1Q9DB98 261 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ftsj3Q9DBE9 838 aaKnown RBP16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Vmn2r121A2BE32 847 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm4302E9PX25 294 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm3164L7N2B9 238 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm3264L7N2C5 238 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 GscQ02591 256 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Sox8Q04886 464 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Erlin2Q8BFZ9 340 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pak4Q8BTW9 593 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Agbl2Q8CDK2 862 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Rftn2Q8CHX7 500 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Smg8Q8VE18 991 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ndufab1Q9CR21 156 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Egfl7Q9QXT5 275 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Iigp1Q9QZ85 413 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Syt5Q9R0N5 386 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Wnt8bQ9WUD6 350 aa16.71■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm9857F7CXR1 130 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Vmn2r55G3UWZ4 781 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Vmn2r53L7N473 806 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 Edil3O35474 480 aa16.7■□□□□ 0.26
Trim39-203ENSMUST00000113706 PrkczQ02956 592 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 37.4 ms