RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Gm45233A0A0N4SVE0 221 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Gucy2dA0A0U1RPR8 1117 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Slc4a11A2AJN7 862 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ankrd16A2AS55 361 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Gm3138K7N754 218 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rpl7aP12970 266 aaKnown RBP7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 RxrbP28704 520 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ptpn11P35235 597 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Kcnq1P97414 668 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Mark3Q03141 753 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Smarcad1Q04692 1021 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Nek10Q3UGM2 1111 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tspyl3Q3UYP3 334 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Zbtb17Q60821 794 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ehbp1Q69ZW3 1231 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Armcx2Q6A058 784 aaKnown RBP7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Q6GQV0 436 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Zdhhc24Q6IR37 284 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Ntrk3Q6VNS1 825 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Olfr670Q7TRP3 312 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Alkbh8Q80Y20 664 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Camta2Q80Y50 1208 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Gm5622Q810Q0 167 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Csde1Q91W50 798 aaKnown RBP7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Bbs5Q9CZQ9 341 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Cul2Q9D4H8 745 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rabl3Q9D4V7 236 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 3830403N18RikQ9D6C3 208 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Tmem86aQ9D8N3 241 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Dydc1Q9D9T0 175 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Capn12Q9ER56 720 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Rab27aQ9ERI2 221 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 PlekQ9JHK5 350 aaKnown RBP7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 PigoQ9JJI6 1093 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 Cog1Q9Z160 980 aa7.96□□□□□ -1.13
Trim40-201ENSMUST00000087158 ThadaA8C756 1938 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 DgkiD3YWQ0 1071 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Rasal2E9PW37 1286 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Apol11aE9PZG0 334 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Gm1661E9Q963 441 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Nrg3O35181 713 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Abcb1bP06795 1276 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 CalrP14211 416 aaKnown RBP7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 SftpdP50404 374 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Shmt1P50431 478 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Psmc4P54775 418 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Sox13Q04891 613 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Pi4k2aQ2TBE6 479 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Hdgfl1Q2VPR5 283 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Q3UE31 404 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Phactr4Q501J7 694 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Oca2Q62052 833 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Six1Q62231 284 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Adam39Q7M762 756 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Wscd1Q80XH4 572 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Pramel7Q810Y8 479 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Aste1Q8BIR2 672 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Pum3Q8BKS9 647 aaKnown RBP7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Pak4Q8BTW9 593 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 E330017A01RikQ8BU47 192 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 UvragQ8K245 698 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Zdhhc3Q8R173 299 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Setd3Q91WC0 594 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Zmat2Q9CPW7 199 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 CactinQ9CS00 772 aaKnown RBP7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Thap12Q9CUX1 758 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 ParvaQ9EPC1 372 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 DpysQ9EQF5 519 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Trpm5Q9JJH7 1158 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Edf1Q9JMG1 148 aaKnown RBP7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Krt17Q9QWL7 433 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Drg2Q9QXB9 364 aaKnown RBP7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 CtsfQ9R013 462 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 Nfs1Q9Z1J3 459 aa7.96□□□□□ -1.14
Trim40-201ENSMUST00000087158 0610012G03RikA0A0J9YTR2 95 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Tldc2A2ACG1 198 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Gm20503G3UZK1 150 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Gm10721J3QPJ9 223 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 PtgisO35074 501 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Ptk2P34152 1090 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Usp10P52479 792 aaKnown RBP7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Fermt1P59113 677 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Lig3P97386 1015 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Atp9bP98195 1146 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Ect2Q07139 913 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Plk1Q07832 603 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Mtus1Q5HZI1 1210 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 HnrnpdQ60668 355 aaKnown RBP7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Avpr1aQ62463 423 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Arhgap10Q6Y5D8 786 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Mrgprb8Q7TN51 330 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Cplx4Q80WM3 160 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Nim1kQ8BHI9 436 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Tmem260Q8BMD6 703 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Wdr35Q8BND3 1181 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Rsad2Q8CBB9 362 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Lsm14bQ8CGC4 385 aaKnown RBP7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Mill1Q8HWE7 395 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Btbd6Q8K2J9 488 aa7.95□□□□□ -1.14
Trim40-201ENSMUST00000087158 Trib2Q8K4K3 343 aa7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms