RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Pdzd4Q9QY39 772 aa24.19■■□□□ 1.46
Upf3a-201ENSMUST00000043767 1700001O22RikA2APZ1 375 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm281D3Z1Y0 860 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Top6blJ3QMY9 579 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Nap1l1P28656 391 aaKnown RBP24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ctnnd1P30999 938 aaKnown RBP24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 OgdhQ60597 1023 aaKnown RBP24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Klra5Q60652 266 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Pan2Q8BGF7 1200 aaKnown RBP24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Pum3Q8BKS9 647 aaKnown RBP24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Q8C5S3 137 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Q8CD60 292 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Kctd15Q8K0E1 283 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Msantd4Q91YU3 345 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gdap2Q9DBL2 498 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 DgkeQ9R1C6 564 aa24.18■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm2030D3Z7C4 212 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 E9QMW4 1145 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 XntrpcF8VQM8 1264 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 IhhP97812 411 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Stip1Q60864 543 aaKnown RBP24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ncapg2Q6DFV1 1138 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Pyhin1Q8BV49 420 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 D630039A03RikQ8K0M7 236 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Trhr2Q9ERT2 382 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 IvdQ9JHI5 424 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 IdeQ9JHR7 1019 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cyp4a29A0A087WPC3 509 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Akap17bA2A3V1 959 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Lrrc63A6H694 637 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Nkx1-1G3UXB3 402 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Bcl7cO08664 217 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Edil3O35474 480 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ptp4a2O70274 167 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Abcb1bP06795 1276 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ccdc33Q3ULW6 985 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 PnocQ64387 187 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Kiaa1841Q68FF0 718 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Tas2r125Q7M710 311 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Neto2Q8BNJ6 525 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Spata2Q8K004 515 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 GhdcQ99J23 532 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Cpne8Q9DC53 577 aa24.17■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm13276A0A087WR18 182 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Slc35g2D3YVE8 412 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm3415J3QMS8 315 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Nr3c1P06537 783 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gja8P28236 440 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gdf6P43028 454 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 PltpP55065 493 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Foxp2P58463 714 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Bpifa6Q0VGU8 367 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gngt1Q61012 74 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 SugctQ7TNE1 436 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 AopepQ8BXQ6 817 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Def6Q8C2K1 630 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Usp27Q8CEG8 438 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Znf830Q8R1N0 363 aaKnown RBP24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Vwa1Q8R2Z5 415 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Fam49bQ921M7 324 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Gm3404Q9D506 307 aa24.16■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Zmym1Q3TJB1 983 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ptpn18Q61152 453 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Olfr1105Q7TR58 312 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Dnajc16Q80TN4 772 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 GopcQ8BH60 463 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Uba3Q8C878 462 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 A430089I19RikQ8C9W1 407 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Eml3Q8VC03 897 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Vmn1r65Q9EPS7 332 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Stat2Q9WVL2 923 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 SqleP52019 572 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Xkr5Q5GH66 676 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Ttf2Q5NC05 1138 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Usp17laQ61068 526 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Tfap2bQ61313 459 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Brat1Q8C3R1 822 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Sdcbp2Q99JZ0 292 aa24.15■■□□□ 1.46
Upf3a-201ENSMUST00000043767 AdkP55264 361 aa24.14■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Serpinb6dQ3UWK8 375 aa24.14■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Rem2Q8VEL9 341 aa24.14■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Them5Q9CQJ0 248 aa24.14■■□□□ 1.46
Upf3a-201ENSMUST00000043767 Olfr1354E9Q5G9 310 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Rdh7O88451 316 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Acbd5Q5XG73 508 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Ift20Q61025 132 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 KaznQ69ZS8 779 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Snrnp25Q8VIK1 123 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 RpainQ9CWY9 219 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Cul2Q9D4H8 745 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Iigp1Q9QZ85 413 aa24.14■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Grik3B1AS29 919 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 P01650 108 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 P01653 108 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Pde6bP23440 856 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Ccdc125Q5U465 500 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Lsm8Q6ZWM4 96 aaKnown RBP24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Fnbp1Q80TY0 616 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 Rufy1Q8BIJ7 712 aa24.13■■□□□ 1.45
Upf3a-201ENSMUST00000043767 PisdQ8BSF4 406 aa24.13■■□□□ 1.45
Retrieved 100 of 22,080 RNA–protein pairs in 33.9 ms