RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 HpdP49429 393 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 SbdsP70122 250 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Map3k9Q3U1V8 1077 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm29609Q3UU56 907 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Cyb5d1Q5NCY3 228 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Dupd1Q8BK84 215 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Gtf3c2Q8BL74 907 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Acbd3Q8BMP6 525 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Slc7a14Q8BXR1 771 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 CenpuQ8C4M7 410 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Cabs1Q8C633 391 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Tex9Q9D845 387 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Pcsk1nQ9QXV0 258 aa17.24■□□□□ 0.35
Shh-201ENSMUST00000002708 Atad5Q4QY64 1826 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 MafgO54790 162 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Lta4hP24527 611 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Hsd17b2P51658 381 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Ugt3a1Q3UP75 523 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Ccdc110Q3V125 848 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Ifnl2Q4VK74 193 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Shroom1Q5SX79 823 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Capn3Q64691 821 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Dcaf15Q6PFH3 600 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Camta2Q80Y50 1208 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Gadd45gQ9Z111 159 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Dhtkd1A2ATU0 921 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Nr3c1P06537 783 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Mmp13P33435 472 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Dab2P98078 766 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm3414Q3TNU4 584 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Glra2Q7TNC8 452 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Slc39a3Q99K24 317 aa17.23■□□□□ 0.35
Shh-201ENSMUST00000002708 Gm9774A0A0A6YVU8 407 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 MipepA6H611 711 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Clk2O35491 499 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 SftpbP50405 377 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Calb2Q08331 271 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Rgl2Q61193 778 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Arhgef18Q6P9R4 1021 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Smg5Q6ZPY2 1017 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Crybg3Q80W49 1005 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Fgd4Q91ZT5 766 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Ier5lQ99J55 406 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Foxp3Q99JB6 429 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Zscan4-ps1A0A1C7CYV3 506 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Zscan4dA7KBS4 506 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Olfr456B2RT27 312 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Tada2bD3Z4Z0 420 aaKnown RBP17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 PdgfraP26618 1089 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Zscan4fQ3URS2 506 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Zscan4cQ80VJ6 506 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Olfr458Q8VF80 313 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Olfr457Q8VGP5 313 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Dkc1Q9ESX5 509 aaKnown RBP17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Tmod4Q9JLH8 345 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Tnfsf13bQ9WU72 309 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Gabbr1Q9WV18 960 aa17.22■□□□□ 0.35
Shh-201ENSMUST00000002708 Tubb1A2AQ07 451 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Tlk2O55047 718 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 ZfxP17012 799 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 PrkchP23298 683 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Pms2P54279 859 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Scarf2P59222 833 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 RenbpP82343 430 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Lipo3Q3UT41 399 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Parp6Q6P6P7 630 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Gpc5Q8CAL5 572 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Arhgap18Q8K0Q5 663 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Vps37bQ8R0J7 285 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Arl8bQ9CQW2 186 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Taf7lQ9D3R9 471 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Il21rQ9JHX3 529 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Dpy19l4A2AJQ3 722 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Rabgap1A2AWA9 1064 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Cyp3a16Q64481 504 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Acot5Q6Q2Z6 421 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Rcn2Q8BP92 320 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Snap47Q8R570 413 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Pcdha9Q91Y11 979 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 PrccQ9EQC8 491 aaKnown RBP17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Rdh14Q9ERI6 334 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Rfx5Q9JL61 658 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Kifc1Q9QWT9 674 aa17.21■□□□□ 0.35
Shh-201ENSMUST00000002708 Rap1gapA2ALS5 663 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Lipo2D3YY49 398 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 BtkP35991 659 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 MafP54843 370 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Cyp2j11Q3UNV2 504 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Ppp4r3cQ3V0Y1 813 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Ddr2Q62371 854 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Ddx55Q6ZPL9 600 aaKnown RBP17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Wdtc1Q80ZK9 677 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Taf5Q8C092 801 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Mamdc2Q8CG85 686 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Thap12Q9CUX1 758 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Smyd3Q9CWR2 428 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Nupr1Q9WTK0 80 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Dicer1Q8R418 1916 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 Ppp1r36D3Z0R2 411 aa17.2■□□□□ 0.34
Shh-201ENSMUST00000002708 DffaO54786 331 aa17.2■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms