RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Nup50Q9JIH2 466 aaKnown RBP9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Capn7Q9R1S8 813 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Kif9Q9WV04 790 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Myh15E9Q264 1925 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Rap1gds1E9Q912 607 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 EsrraO08580 422 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Srpk1O70551 648 aaKnown RBP9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Myl1P05977 188 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Lmnb1P14733 588 aaKnown RBP9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 GcP21614 476 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Sycp3P70281 254 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ddr1Q03146 911 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Shroom1Q5SX79 823 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Arl13bQ640N2 427 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Arhgap10Q6Y5D8 786 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Fbxo44Q8BK26 255 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Pum3Q8BKS9 647 aaKnown RBP9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Clec4gQ8BNX1 294 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Fbxo43Q8CDI2 640 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Pcdha9Q91Y11 979 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Psip1Q99JF8 528 aaKnown RBP9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Rilpl2Q99LE1 197 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 HemgnQ9ERZ0 503 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ccdc22Q9JIG7 627 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Kifc1Q9QWT9 674 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Krt16Q9Z2K1 469 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Speer3W4VSP1 261 aa9.91□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Col18a1P39061 1774 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Atp8b4A2ANX3 1194 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Cdo1P60334 200 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Arl4aP61213 200 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Npr3P70180 536 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Ptprn2P80560 1001 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 NfiaQ02780 532 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 E2f7Q6S7F2 904 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Senp7Q8BUH8 1037 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Btbd9Q8C726 612 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Cep57Q8CEE0 500 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 UvragQ8K245 698 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Trpv6Q91WD2 767 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Nme3Q9WV85 169 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gm379J3QQ19 296 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Zfp457L7N1X4 647 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Barx2O08686 283 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Elk3P41971 409 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Cog7Q3UM29 770 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Spag6Q3V0U9 509 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 PighQ5M9N4 188 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Dcaf15Q6PFH3 600 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Dcun1d2Q8BZJ7 259 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Tesk2Q8VCT9 570 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 FtcdQ91XD4 541 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Hars2Q99KK9 505 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Dgcr8Q9EQM6 773 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Rnf25Q9QZR0 456 aa9.9□□□□□ -0.82
Col6a1-201ENSMUST00000001147 Gm29554A0A087WNW4 188 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 B020011L13RikA0A087WQI7 412 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup10A2BIN1 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup14A2CEK7 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup19A9C497 187 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup15A9R9W0 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup17B5X0G2 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup8E9PVW0 235 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup7E9QA79 235 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Rpl21O09167 160 aaKnown RBP9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup6P02762 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup1P11588 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mup2P11589 180 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Mxi1P50540 228 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Map4k1P70218 827 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 NyxP83503 476 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Cdk16Q04735 496 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Klhl14Q69ZK5 630 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Klhl38Q8BSF5 581 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Sh3rf3Q8C120 878 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Agap3Q8VHH5 910 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Caskin2Q8VHK1 1201 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Spns2Q91VM4 549 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ptdss1Q99LH2 473 aaKnown RBP9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Kndc1Q0KK55 1742 aa9.9□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ssxb9A2BI93 185 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Maml3D4QGC2 1135 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Birc5O70201 140 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 PigrO70570 771 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Ccng1P51945 294 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Usp10P52479 792 aaKnown RBP9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Npas2P97460 816 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Neurl1bQ0MW30 546 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Pih1d3Q3KNI6 218 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Zfyve28Q6ZPK7 905 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Orai2Q8BH10 250 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 3830417A13RikQ8BQJ2 303 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Phactr3Q8BYK5 558 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Tgif2lx2Q8K5B9 231 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Rpp40Q8R1F9 363 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Psmd6Q99JI4 389 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Drc3Q9D5E4 523 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 IvdQ9JHI5 424 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Gabbr1Q9WV18 960 aa9.89□□□□□ -0.83
Col6a1-201ENSMUST00000001147 Gm10250G3X9L6 160 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms