RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	CUE4	Q04201	117 aa	Predicted RBP	4.86	□□□□□ -1.63
RPN7	YPR108W	NAT3	Q06504	195 aa		4.86	□□□□□ -1.63
RPN7	YPR108W	UTP23	Q12339	254 aa	Known RBP	4.86	□□□□□ -1.63
RPN7	YPR108W	YPR071W	Q12346	211 aa		4.86	□□□□□ -1.63
RPN7	YPR108W	YBR255C-A	Q3E776	120 aa		4.86	□□□□□ -1.63
RPN7	YPR108W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.86	□□□□□ -1.63
RPN7	YPR108W	HTL1	Q9URQ5	78 aa		4.86	□□□□□ -1.63
RPN7	YPR108W	HFA1	P32874	2273 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	HTB2	P02294	131 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	RPL39	P04650	51 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	RNA15	P25299	296 aa	Predicted RBP	4.85	□□□□□ -1.63
RPN7	YPR108W	YGL010W	P25338	174 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	ELO2	P25358	347 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	RPS2	P25443	254 aa	Known RBP	4.85	□□□□□ -1.63
RPN7	YPR108W	AGA2	P32781	87 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	YKL187C	P34231	750 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	NNK1	P36003	928 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	YNK1	P36010	153 aa	Known RBP	4.85	□□□□□ -1.63
RPN7	YPR108W	CSH1	P38287	376 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	ECM14	P38836	430 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	LOC1	P43586	204 aa	Predicted RBP	4.85	□□□□□ -1.63
RPN7	YPR108W	TAX4	P47030	604 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	COX16	P47081	118 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	NCE103	P53615	221 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	ATP19	P81451	68 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	UBC7	Q02159	165 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	DYN2	Q02647	92 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	ADH6	Q04894	360 aa	Known RBP	4.85	□□□□□ -1.63
RPN7	YPR108W	POS5	Q06892	414 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	FYV7	Q12247	151 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	YLR122C	Q12312	125 aa		4.85	□□□□□ -1.63
RPN7	YPR108W	FRS1	P15624	595 aa	Known RBP	4.84	□□□□□ -1.63
RPN7	YPR108W	RPI1	P23250	407 aa	Known RBP	4.84	□□□□□ -1.63
RPN7	YPR108W	YCR025C	P25352	136 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	DAL80	P26343	269 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	RPS0A	P32905	252 aa	Known RBP	4.84	□□□□□ -1.63
RPN7	YPR108W	MIA40	P36046	403 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	DAD2	P36162	133 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	YPT10	P38146	199 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	YGP1	P38616	354 aa	Known RBP	4.84	□□□□□ -1.63
RPN7	YPR108W	SED1	Q01589	338 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	ARL3	Q02804	198 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	YMR007W	Q03675	126 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	UPS3	Q04006	179 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	TRI1	Q05024	226 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	YOL118C	Q08259	102 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	ERV2	Q12284	196 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	YPR145C-A	Q2V2P0	78 aa		4.84	□□□□□ -1.63
RPN7	YPR108W	TMA7	Q3E764	64 aa	Known RBP	4.84	□□□□□ -1.63
RPN7	YPR108W	SEN1	Q00416	2231 aa	Known RBP	4.84	□□□□□ -1.64
RPN7	YPR108W	MRS1	P07266	363 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	COQ3	P27680	312 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	PAU7	P39545	55 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	DFG10	P40526	253 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	YDL183C	P48569	320 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	CNL1	Q06333	122 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	NDE2	Q07500	545 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	CSM4	Q08955	156 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	ATX2	Q12067	313 aa		4.83	□□□□□ -1.64
RPN7	YPR108W	ACC1	Q00955	2233 aa	Known RBP	4.82	□□□□□ -1.64
RPN7	YPR108W	VMA16	P23968	213 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	MRPL11	P36521	249 aa	Predicted RBP	4.82	□□□□□ -1.64
RPN7	YPR108W	MRPL28	P36527	147 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	SFT2	P38166	215 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	SDH8	P38345	138 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	CUE1	P38428	203 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	SEC72	P39742	193 aa	Known RBP	4.82	□□□□□ -1.64
RPN7	YPR108W	YJL163C	P46996	555 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	YGL118C	P53132	145 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	GIM5	Q04493	163 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	YTH1	Q06102	208 aa	Predicted RBP	4.82	□□□□□ -1.64
RPN7	YPR108W	GAT3	Q07928	141 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	LDS2	Q08218	356 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	POC4	Q12245	148 aa	Predicted RBP	4.82	□□□□□ -1.64
RPN7	YPR108W	JID1	Q12350	301 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	POM34	Q12445	299 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	YMR105W-A	Q8TGS8	64 aa		4.82	□□□□□ -1.64
RPN7	YPR108W	DDI2	P0CH63	225 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	DDI3	P0CH64	225 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	ADH5	P38113	351 aa	Known RBP	4.81	□□□□□ -1.64
RPN7	YPR108W	AME1	P38313	324 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	BDH1	P39714	382 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	LST8	P41318	303 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	CRH1	P53301	507 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	DAD1	Q12248	94 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	YNR034W-A	Q3E841	98 aa		4.81	□□□□□ -1.64
RPN7	YPR108W	SEC16	P48415	2195 aa	Known RBP	4.81	□□□□□ -1.64
RPN7	YPR108W	ADE8	P04161	214 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	RPL31B	P0C2H9	113 aa	Known RBP	4.8	□□□□□ -1.64
RPN7	YPR108W	TIR1	P10863	254 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	MDM10	P18409	493 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	MRS4	P23500	304 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	TIR2	P33890	251 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	YFL051C	P43552	160 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	ERV14	P53173	138 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	CWC27	Q02770	301 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	MIX17	Q03667	156 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	YPL162C	Q12042	273 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	FMP27	Q06179	2628 aa		4.8	□□□□□ -1.64
RPN7	YPR108W	RPL11A	P0C0W9	174 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms