RNA–Protein interactions for RNA: YPL178W

CBC2, Transcript of Small subunit of the heterodimeric cap binding complex with Sto1p, yeast

Gene CBC2, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBC2	YPL178W	MRPL23	Q12487	163 aa	Predicted RBP	4.26	□□□□□ -1.73
CBC2	YPL178W	FCY2	P17064	533 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	PRE1	P22141	198 aa	Known RBP	4.25	□□□□□ -1.73
CBC2	YPL178W	MSN1	P22148	382 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	LDS1	P31379	325 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	YBL071C	P38185	102 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	RRT1	P38192	103 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	WSS1	P38838	269 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	WWM1	P43582	211 aa	Known RBP	4.25	□□□□□ -1.73
CBC2	YPL178W	RPA43	P46669	326 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	CPD1	P53314	239 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	CAB4	P53332	305 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	EOS1	P53938	366 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	GTO3	Q04806	366 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	YLR179C	Q06252	201 aa	Known RBP	4.25	□□□□□ -1.73
CBC2	YPL178W	FRQ1	Q06389	190 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	COA2	Q3E823	68 aa		4.25	□□□□□ -1.73
CBC2	YPL178W	SOD1	P00445	154 aa	Known RBP	4.24	□□□□□ -1.73
CBC2	YPL178W	RPS25B	P0C0T4	108 aa	Known RBP	4.24	□□□□□ -1.73
CBC2	YPL178W	YPS1	P32329	569 aa		4.24	□□□□□ -1.73
CBC2	YPL178W	FPR2	P32472	135 aa		4.24	□□□□□ -1.73
CBC2	YPL178W	YEA4	P40004	342 aa		4.24	□□□□□ -1.73
CBC2	YPL178W	LRS4	Q04087	347 aa	Known RBP	4.24	□□□□□ -1.73
CBC2	YPL178W	YMR082C	Q04276	118 aa		4.24	□□□□□ -1.73
CBC2	YPL178W	ANT1	Q06497	328 aa		4.24	□□□□□ -1.73
CBC2	YPL178W	SDO1	Q07953	250 aa	Known RBP	4.24	□□□□□ -1.73
CBC2	YPL178W	WIP1	Q2V2P8	89 aa		4.24	□□□□□ -1.73
CBC2	YPL178W	RPS25A	Q3E792	108 aa	Predicted RBP	4.24	□□□□□ -1.73
CBC2	YPL178W	MRS4	P23500	304 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	UPS2	P35200	230 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	MRPL4	P36517	319 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	YAR068W	P39564	161 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	FIP1	P45976	327 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	YGR219W	P53307	113 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	SWT21	P53873	357 aa	Predicted RBP	4.23	□□□□□ -1.73
CBC2	YPL178W	YPL080C	Q02826	108 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	SDH7	Q04401	133 aa		4.23	□□□□□ -1.73
CBC2	YPL178W	COX2	P00410	251 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	RPL31A	P0C2H8	113 aa	Known RBP	4.22	□□□□□ -1.73
CBC2	YPL178W	RPL31B	P0C2H9	113 aa	Known RBP	4.22	□□□□□ -1.73
CBC2	YPL178W	YHR212W-A	P0CX91	67 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	MRS3	P10566	314 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	SEC59	P20048	519 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	MIG1	P27705	504 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YBR144C	P34215	104 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	AME1	P38313	324 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	MIC12	P38341	106 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	ASP1	P38986	381 aa	Predicted RBP	4.22	□□□□□ -1.73
CBC2	YPL178W	PEX7	P39108	375 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YNL194C	P40169	301 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YPI1	P43587	155 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	TAD2	P47058	250 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YJR015W	P47090	510 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	MOG1	P47123	218 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	JAC1	P53193	184 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	NCE103	P53615	221 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YNR066C	P53752	436 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YML122C	Q03207	126 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	TVP18	Q04767	167 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	RXT3	Q07458	294 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	IRC23	Q08416	157 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	POC4	Q12245	148 aa	Predicted RBP	4.22	□□□□□ -1.73
CBC2	YPL178W	PRR2	Q12310	699 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YGL194C-A	Q2V2P6	80 aa		4.22	□□□□□ -1.73
CBC2	YPL178W	YDR157W	A0A023PZE8	133 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	PIS1	P06197	220 aa	Known RBP	4.21	□□□□□ -1.74
CBC2	YPL178W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
CBC2	YPL178W	UBI4	P0CG63	381 aa	Known RBP	4.21	□□□□□ -1.74
CBC2	YPL178W	SRB6	P32570	121 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	RIB5	P38145	238 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	QDR3	P38227	689 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	BDH1	P39714	382 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	GCV3	P39726	170 aa	Predicted RBP	4.21	□□□□□ -1.74
CBC2	YPL178W	SEC72	P39742	193 aa	Known RBP	4.21	□□□□□ -1.74
CBC2	YPL178W	PGD1	P40356	397 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	SNN1	P48232	102 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	BUL1	P48524	976 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	MIC27	P50945	234 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	YMR181C	Q03231	154 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	YHP1	Q04116	353 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	RRG8	Q06109	277 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	POS5	Q06892	414 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	YPL257W	Q08974	193 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	YPR014C	Q6B0W2	109 aa		4.21	□□□□□ -1.74
CBC2	YPL178W	YOR304C-A	O14468	76 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	ADH2	P00331	348 aa	Known RBP	4.2	□□□□□ -1.74
CBC2	YPL178W	CYC3	P06182	269 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	QCR9	P22289	66 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	UTR5	P32630	166 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	SSS1	P35179	80 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	CSH1	P38287	376 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	YBR292C	P38357	123 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	POR2	P40478	281 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	YAR1	P46683	200 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	LST7	P53237	242 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	COX18	P53239	316 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	BOR1	P53838	576 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	DIA1	P54005	336 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	ODC1	Q03028	310 aa		4.2	□□□□□ -1.74
CBC2	YPL178W	YMR253C	Q04835	414 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms