RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLP1	YOR250C	OM14	P38325	134 aa		4.8	□□□□□ -1.64
CLP1	YOR250C	HAC1	P41546	238 aa		4.8	□□□□□ -1.64
CLP1	YOR250C	YJR015W	P47090	510 aa		4.8	□□□□□ -1.64
CLP1	YOR250C	MSO1	P53604	210 aa	Known RBP	4.8	□□□□□ -1.64
CLP1	YOR250C	ERG13	P54839	491 aa	Known RBP	4.8	□□□□□ -1.64
CLP1	YOR250C	AIM11	P87275	137 aa		4.8	□□□□□ -1.64
CLP1	YOR250C	YMR090W	Q04304	227 aa	Known RBP	4.8	□□□□□ -1.64
CLP1	YOR250C	USB1	Q12208	290 aa	Known RBP	4.8	□□□□□ -1.64
CLP1	YOR250C	FPR1	P20081	114 aa	Known RBP	4.79	□□□□□ -1.64
CLP1	YOR250C	SCO1	P23833	295 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	YCR007C	P25354	239 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	AHT1	P29589	182 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	UTR5	P32630	166 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	FMP46	P36141	133 aa	Known RBP	4.79	□□□□□ -1.64
CLP1	YOR250C	MIC12	P38341	106 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	YHR210C	P38893	341 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	YER188W	P40103	239 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	BRR6	P53062	197 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	NAT5	Q08689	176 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	YPL264C	Q08980	353 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	YOR343C	Q12484	108 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	KTI11	Q3E840	82 aa		4.79	□□□□□ -1.64
CLP1	YOR250C	YPR117W	Q06116	2489 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	AQY1	P0CD91	305 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	PBI2	P0CT04	75 aa	Known RBP	4.78	□□□□□ -1.64
CLP1	YOR250C	ERG2	P32352	222 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	YKL102C	P34249	101 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	YHR180W	P38868	163 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	YNL194C	P40169	301 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	MSL1	P40567	111 aa	Predicted RBP	4.78	□□□□□ -1.64
CLP1	YOR250C	SNO3	P43544	222 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	SCW10	Q04951	389 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	MIM1	Q08176	113 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	YOR029W	Q12243	111 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	FRE7	Q12333	620 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	YLR365W	Q7LIF2	110 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	YBR126W-A	Q8TGU7	68 aa		4.78	□□□□□ -1.64
CLP1	YOR250C	POR1	P04840	283 aa	Known RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	URA5	P13298	226 aa	Known RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	FCY2	P17064	533 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	PHO85	P17157	305 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	YMR31	P19955	123 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	SPO13	P23624	291 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	GLC7	P32598	312 aa	Known RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	SWD2	P36104	329 aa	Predicted RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	PRS4	P38063	326 aa	Predicted RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	YPT10	P38146	199 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	YJL193W	P39542	402 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	YFL015C	P43578	164 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	YDL186W	P48568	277 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	RHO5	P53879	331 aa	Known RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	HRI1	Q05905	244 aa	Known RBP	4.77	□□□□□ -1.65
CLP1	YOR250C	STP3	Q05937	343 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	MCH4	Q08268	501 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	ISD11	Q6Q560	94 aa		4.77	□□□□□ -1.65
CLP1	YOR250C	FMP49	A0A023PZB3	126 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	ERV1	P27882	189 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	CMC1	P36064	111 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	MIX23	P38162	196 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	RPB11	P38902	120 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	YER076C	P40049	302 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	YNL208W	P40159	199 aa	Known RBP	4.76	□□□□□ -1.65
CLP1	YOR250C	PRE5	P40302	234 aa	Known RBP	4.76	□□□□□ -1.65
CLP1	YOR250C	YJL118W	P47022	219 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	TTI2	P47168	421 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	YML053C	Q04978	212 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	YOL029C	Q08187	201 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	YKL183C-A	Q3E765	70 aa		4.76	□□□□□ -1.65
CLP1	YOR250C	MBF1	O14467	151 aa	Known RBP	4.75	□□□□□ -1.65
CLP1	YOR250C	INO4	P13902	151 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	CPT1	P17898	393 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	RAD23	P32628	398 aa	Known RBP	4.75	□□□□□ -1.65
CLP1	YOR250C	YKL187C	P34231	750 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	PAU16	P35994	123 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	SHB17	P36136	271 aa	Known RBP	4.75	□□□□□ -1.65
CLP1	YOR250C	PSD1	P39006	500 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	YFR057W	P43625	151 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	PDR17	P53844	350 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	TDA7	P53882	636 aa	Predicted RBP	4.75	□□□□□ -1.65
CLP1	YOR250C	YMR166C	Q03829	368 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	YPR174C	Q06616	221 aa	Predicted RBP	4.75	□□□□□ -1.65
CLP1	YOR250C	CSI2	Q08054	341 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	GEP3	Q08622	556 aa		4.75	□□□□□ -1.65
CLP1	YOR250C	RPS22A	P0C0W1	130 aa	Known RBP	4.74	□□□□□ -1.65
CLP1	YOR250C	YLL053C	P0CD98	152 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	QCR9	P22289	66 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	YGL010W	P25338	174 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	SPS18	P32572	300 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	REC114	P32841	428 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	LYS1	P38998	373 aa	RIP-Chip data	4.74	□□□□□ -1.65	not detected
CLP1	YOR250C	YFR054C	P43622	192 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	GPI2	P46961	280 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	SBH1	P52870	82 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	UPS1	Q05776	175 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	IRC19	Q07843	230 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	YPR108W-A	Q3E7B3	70 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	NAG1	Q8TGN9	163 aa		4.74	□□□□□ -1.65
CLP1	YOR250C	ZRT1	P32804	376 aa		4.73	□□□□□ -1.65
CLP1	YOR250C	RPB7	P34087	171 aa		4.73	□□□□□ -1.65
CLP1	YOR250C	DUG3	P53871	357 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms