RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W NSE4P43124 402 aa1.46□□□□□ -2.18
PEP12YOR036W BAT2P47176 376 aaKnown RBP1.46□□□□□ -2.18
PEP12YOR036W DML1Q03652 475 aa1.46□□□□□ -2.18
PEP12YOR036W CSN9Q03981 162 aa1.46□□□□□ -2.18
PEP12YOR036W YMR320WQ04897 101 aa1.46□□□□□ -2.18
PEP12YOR036W YHR007C-AQ07074 71 aa1.46□□□□□ -2.18
PEP12YOR036W RAD6P06104 172 aa1.45□□□□□ -2.18
PEP12YOR036W GPA2P10823 449 aa1.45□□□□□ -2.18
PEP12YOR036W GSP2P32836 220 aaKnown RBP1.45□□□□□ -2.18
PEP12YOR036W PTC1P35182 281 aa1.45□□□□□ -2.18
PEP12YOR036W PHB1P40961 287 aa1.45□□□□□ -2.18
PEP12YOR036W FIP1P45976 327 aa1.45□□□□□ -2.18
PEP12YOR036W YAE1P47118 141 aaPredicted RBP1.45□□□□□ -2.18
PEP12YOR036W YGL193CP53097 103 aa1.45□□□□□ -2.18
PEP12YOR036W YDR366CP87287 132 aa1.45□□□□□ -2.18
PEP12YOR036W UBC7Q02159 165 aa1.45□□□□□ -2.18
PEP12YOR036W GRX5Q02784 150 aa1.45□□□□□ -2.18
PEP12YOR036W YDR391CQ04170 232 aa1.45□□□□□ -2.18
PEP12YOR036W SYM1Q06563 197 aa1.45□□□□□ -2.18
PEP12YOR036W RFU1Q08003 200 aa1.45□□□□□ -2.18
PEP12YOR036W FIT2Q08906 153 aa1.45□□□□□ -2.18
PEP12YOR036W NHP6AP11632 93 aaKnown RBP1.44□□□□□ -2.18
PEP12YOR036W SUA7P29055 345 aaPredicted RBP1.44□□□□□ -2.18
PEP12YOR036W YRA2P36036 203 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
PEP12YOR036W HTD2P38790 280 aaKnown RBP1.44□□□□□ -2.18
PEP12YOR036W YEL073CP39974 107 aa1.44□□□□□ -2.18
PEP12YOR036W HPA3P39979 161 aa1.44□□□□□ -2.18
PEP12YOR036W RIO2P40160 425 aaKnown RBP1.44□□□□□ -2.18
PEP12YOR036W FLX1P40464 311 aa1.44□□□□□ -2.18
PEP12YOR036W ALB1P47019 175 aaPredicted RBP1.44□□□□□ -2.18
PEP12YOR036W PAC10P48363 199 aa1.44□□□□□ -2.18
PEP12YOR036W HHO1P53551 258 aa1.44□□□□□ -2.18
PEP12YOR036W DYN2Q02647 92 aa1.44□□□□□ -2.18
PEP12YOR036W COF1Q03048 143 aaKnown RBP1.44□□□□□ -2.18
PEP12YOR036W YHP1Q04116 353 aa1.44□□□□□ -2.18
PEP12YOR036W YDR278CQ05612 105 aa1.44□□□□□ -2.18
PEP12YOR036W UPS1Q05776 175 aa1.44□□□□□ -2.18
PEP12YOR036W YPD1Q07688 167 aa1.44□□□□□ -2.18
PEP12YOR036W HRD1Q08109 551 aa1.44□□□□□ -2.18
PEP12YOR036W TRM3Q07527 1436 aa1.43□□□□□ -2.18
PEP12YOR036W YOL162WP0CF19 215 aa1.43□□□□□ -2.18
PEP12YOR036W MAK31P23059 88 aa1.43□□□□□ -2.18
PEP12YOR036W PRS3P38689 320 aaKnown RBP1.43□□□□□ -2.18
PEP12YOR036W YEL028WP39989 153 aa1.43□□□□□ -2.18
PEP12YOR036W YER181CP40097 107 aa1.43□□□□□ -2.18
PEP12YOR036W MPM1P40364 252 aa1.43□□□□□ -2.18
PEP12YOR036W CIN5P40917 295 aa1.43□□□□□ -2.18
PEP12YOR036W YGR039WP53225 103 aa1.43□□□□□ -2.18
PEP12YOR036W PIR1Q03178 341 aa1.43□□□□□ -2.18
PEP12YOR036W MZM1Q03429 123 aaPredicted RBP1.43□□□□□ -2.18
PEP12YOR036W RIM9Q04734 239 aa1.43□□□□□ -2.18
PEP12YOR036W RAD50P12753 1312 aa1.42□□□□□ -2.18
PEP12YOR036W MSB2P32334 1306 aa1.42□□□□□ -2.18
PEP12YOR036W RPC19P28000 142 aaKnown RBP1.42□□□□□ -2.18
PEP12YOR036W SPT14P32363 452 aa1.42□□□□□ -2.18
PEP12YOR036W RPB7P34087 171 aa1.42□□□□□ -2.18
PEP12YOR036W HYR1P40581 163 aaKnown RBP1.42□□□□□ -2.18
PEP12YOR036W GPI2P46961 280 aa1.42□□□□□ -2.18
PEP12YOR036W CWC27Q02770 301 aa1.42□□□□□ -2.18
PEP12YOR036W YDR102CQ03864 110 aa1.42□□□□□ -2.18
PEP12YOR036W ATG41Q12048 136 aa1.42□□□□□ -2.18
PEP12YOR036W ATP14Q12349 124 aa1.42□□□□□ -2.18
PEP12YOR036W QCR8P08525 94 aa1.41□□□□□ -2.18
PEP12YOR036W SEN2P16658 377 aa1.41□□□□□ -2.18
PEP12YOR036W STF2P16965 84 aa1.41□□□□□ -2.18
PEP12YOR036W MRPL24P36525 258 aaPredicted RBP1.41□□□□□ -2.18
PEP12YOR036W YJL218WP40892 196 aaKnown RBP1.41□□□□□ -2.18
PEP12YOR036W TIM8P57744 87 aa1.41□□□□□ -2.18
PEP12YOR036W RCE1Q03530 315 aa1.41□□□□□ -2.18
PEP12YOR036W LIP1Q03579 150 aa1.41□□□□□ -2.18
PEP12YOR036W FMN1Q03778 218 aa1.41□□□□□ -2.18
PEP12YOR036W SPC24Q04477 213 aa1.41□□□□□ -2.18
PEP12YOR036W YMR252CQ04814 134 aa1.41□□□□□ -2.18
PEP12YOR036W FCY1Q12178 158 aa1.41□□□□□ -2.18
PEP12YOR036W SLO1Q3E784 85 aa1.41□□□□□ -2.18
PEP12YOR036W YNL146C-AQ3E7Z1 64 aa1.41□□□□□ -2.18
PEP12YOR036W PHO13P19881 312 aa1.4□□□□□ -2.19
PEP12YOR036W FPR1P20081 114 aaKnown RBP1.4□□□□□ -2.19
PEP12YOR036W SRP21P32342 167 aa1.4□□□□□ -2.19
PEP12YOR036W RPS20P38701 121 aaKnown RBP1.4□□□□□ -2.19
PEP12YOR036W YHL042WP38729 150 aa1.4□□□□□ -2.19
PEP12YOR036W CCS1P40202 249 aaKnown RBP1.4□□□□□ -2.19
PEP12YOR036W GLC8P41818 229 aa1.4□□□□□ -2.19
PEP12YOR036W UPS3Q04006 179 aa1.4□□□□□ -2.19
PEP12YOR036W YPR114WQ06107 315 aa1.4□□□□□ -2.19
PEP12YOR036W CNL1Q06333 122 aa1.4□□□□□ -2.19
PEP12YOR036W ATG10Q07879 167 aa1.4□□□□□ -2.19
PEP12YOR036W SPC3Q12133 184 aa1.4□□□□□ -2.19
PEP12YOR036W INO4P13902 151 aa1.39□□□□□ -2.19
PEP12YOR036W HSP12P22943 109 aaKnown RBP1.39□□□□□ -2.19
PEP12YOR036W YBL010CP32788 280 aa1.39□□□□□ -2.19
PEP12YOR036W SHB17P36136 271 aaKnown RBP1.39□□□□□ -2.19
PEP12YOR036W VMA10P48836 114 aaKnown RBP1.39□□□□□ -2.19
PEP12YOR036W RCF2P53721 224 aa1.39□□□□□ -2.19
PEP12YOR036W YNR064CP53750 290 aa1.39□□□□□ -2.19
PEP12YOR036W EST3Q03096 181 aa1.39□□□□□ -2.19
PEP12YOR036W SDH7Q04401 133 aa1.39□□□□□ -2.19
PEP12YOR036W NKP2Q06162 153 aa1.39□□□□□ -2.19
PEP12YOR036W RRT7Q07829 113 aa1.39□□□□□ -2.19
PEP12YOR036W YMR030W-AQ3E760 96 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 107.5 ms