RNA–Protein interactions for RNA: YMR292W

GOT1, Transcript of Homodimeric protein that is packaged into COPII vesicles, yeast

Gene GOT1, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GOT1	YMR292W	IRC25	Q07951	179 aa		2.66	□□□□□ -1.98
GOT1	YMR292W	PAU20	Q08322	120 aa		2.66	□□□□□ -1.98
GOT1	YMR292W	RAD28	Q12021	506 aa		2.66	□□□□□ -1.98
GOT1	YMR292W	ATP16	Q12165	160 aa		2.66	□□□□□ -1.98
GOT1	YMR292W	PAU9	Q3E770	120 aa		2.66	□□□□□ -1.98
GOT1	YMR292W	ADE8	P04161	214 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	PIS1	P06197	220 aa	Known RBP	2.65	□□□□□ -1.99
GOT1	YMR292W	TOM40	P23644	387 aa	Known RBP	2.65	□□□□□ -1.99
GOT1	YMR292W	YCR022C	P25620	114 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	POP5	P28005	173 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	ALK2	P32789	676 aa	Predicted RBP	2.65	□□□□□ -1.99
GOT1	YMR292W	VMA11	P32842	164 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	MRPL4	P36517	319 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	MRPS9	P38120	278 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	YBR090C	P38253	122 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	YPT31	P38555	223 aa	Known RBP	2.65	□□□□□ -1.99
GOT1	YMR292W	PET100	P38958	111 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	BDH1	P39714	382 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	HUA1	P40325	198 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	YIL163C	P40448	117 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	GTT1	P40582	234 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	MOG1	P47123	218 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	MIC27	P50945	234 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	YGR018C	P53211	109 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	LST7	P53237	242 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	FYV6	P53913	173 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	ARR2	Q06597	130 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	STP4	Q07351	490 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	NDE2	Q07500	545 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	CSI2	Q08054	341 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	LDS2	Q08218	356 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	IRC23	Q08416	157 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	RDL1	Q12305	139 aa	Known RBP	2.65	□□□□□ -1.99
GOT1	YMR292W	YLR118C	Q12354	227 aa		2.65	□□□□□ -1.99
GOT1	YMR292W	PET494	P07390	489 aa	Predicted RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	BGL2	P15703	313 aa	Known RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	SEC59	P20048	519 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	RPS2	P25443	254 aa	Known RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	PHD1	P36093	366 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	CSH1	P38287	376 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	IMD2	P38697	523 aa	Known RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	YAR068W	P39564	161 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	NOP16	P40007	231 aa	Known RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	PAU15	P40585	124 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	ATG27	P46989	271 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	SSU72	P53538	206 aa	Predicted RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	ATC1	Q04005	294 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	ADH6	Q04894	360 aa	Known RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	LOA1	Q06508	300 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	JID1	Q12350	301 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	GEP5	Q12393	293 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	PAA1	Q12447	191 aa	Known RBP	2.64	□□□□□ -1.99
GOT1	YMR292W	Q0297	Q9ZZV8	51 aa		2.64	□□□□□ -1.99
GOT1	YMR292W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.63	□□□□□ -1.99	not detected
GOT1	YMR292W	RNA15	P25299	296 aa	Predicted RBP	2.63	□□□□□ -1.99
GOT1	YMR292W	YPS1	P32329	569 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	FPR2	P32472	135 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	AFR1	P33304	620 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	YNK1	P36010	153 aa	Known RBP	2.63	□□□□□ -1.99
GOT1	YMR292W	AVT5	P38176	459 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	LSM2	P38203	95 aa	Known RBP	2.63	□□□□□ -1.99
GOT1	YMR292W	SDH8	P38345	138 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	DOG2	P38773	246 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	DOG1	P38774	246 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	GLE2	P40066	365 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	YJL163C	P46996	555 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	MGA1	P53050	456 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	DAD3	P69850	94 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	YMR166C	Q03829	368 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	YMR317W	Q04893	1140 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	NAT3	Q06504	195 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	ZEO1	Q08245	113 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	FIT2	Q08906	153 aa		2.63	□□□□□ -1.99
GOT1	YMR292W	NUM1	Q00402	2748 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	CDC7	P06243	507 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	RPS22A	P0C0W1	130 aa	Known RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	YHR213W	P0CI67	198 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	NHP6A	P11632	93 aa	Known RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	HMX1	P32339	317 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	RAD23	P32628	398 aa	Known RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	MRPL38	P35996	138 aa	Predicted RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	SFT2	P38166	215 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	YBL071C	P38185	102 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	CDS1	P38221	457 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	SRP14	P38985	146 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	SNU13	P39990	126 aa	Known RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	GPP2	P40106	250 aa	Known RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	GPI2	P46961	280 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	YIP1	P53039	248 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	TOM7	P53507	60 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	RAV2	Q03956	351 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	DXO1	Q06349	442 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	PBP4	Q07362	185 aa	Known RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	AYT1	Q12226	474 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	SNU23	Q12368	194 aa	Predicted RBP	2.62	□□□□□ -1.99
GOT1	YMR292W	YOP1	Q12402	180 aa		2.62	□□□□□ -1.99
GOT1	YMR292W	FMP49	A0A023PZB3	126 aa		2.61	□□□□□ -1.99
GOT1	YMR292W	YLR302C	O13544	120 aa		2.61	□□□□□ -1.99
GOT1	YMR292W	SRP21	P32342	167 aa		2.61	□□□□□ -1.99
GOT1	YMR292W	YHL044W	P38727	235 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms