RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W ATG10Q07879 167 aa0.73□□□□□ -2.29
DDR48YMR173W LCL2Q08045 131 aa0.73□□□□□ -2.29
DDR48YMR173W PST2Q12335 198 aaKnown RBP0.73□□□□□ -2.29
DDR48YMR173W RDI1Q12434 202 aa0.73□□□□□ -2.29
DDR48YMR173W CHD1P32657 1468 aa0.73□□□□□ -2.29
DDR48YMR173W SEN2P16658 377 aa0.72□□□□□ -2.29
DDR48YMR173W YEL008WP40001 126 aa0.72□□□□□ -2.29
DDR48YMR173W MOB1P40484 314 aa0.72□□□□□ -2.29
DDR48YMR173W RPL37BP51402 88 aaKnown RBP0.72□□□□□ -2.29
DDR48YMR173W YGL230CP53074 147 aa0.72□□□□□ -2.29
DDR48YMR173W YGL101WP53144 215 aa0.72□□□□□ -2.29
DDR48YMR173W HHT1P61830 136 aa0.72□□□□□ -2.29
DDR48YMR173W HSK3P69852 69 aa0.72□□□□□ -2.29
DDR48YMR173W AIM36Q03798 255 aa0.72□□□□□ -2.29
DDR48YMR173W THI74Q04083 370 aa0.72□□□□□ -2.29
DDR48YMR173W RIM9Q04734 239 aa0.72□□□□□ -2.29
DDR48YMR173W SYM1Q06563 197 aa0.72□□□□□ -2.29
DDR48YMR173W YPD1Q07688 167 aa0.72□□□□□ -2.29
DDR48YMR173W FYV12Q08559 129 aa0.72□□□□□ -2.29
DDR48YMR173W TAR1Q8TGM6 124 aa0.72□□□□□ -2.29
DDR48YMR173W TRM3Q07527 1436 aa0.72□□□□□ -2.29
DDR48YMR173W QCR2P07257 368 aa0.71□□□□□ -2.3
DDR48YMR173W RPS25BP0C0T4 108 aaKnown RBP0.71□□□□□ -2.3
DDR48YMR173W PRE1P22141 198 aaKnown RBP0.71□□□□□ -2.3
DDR48YMR173W YGR269WP40326 108 aa0.71□□□□□ -2.3
DDR48YMR173W DLS1P40366 167 aa0.71□□□□□ -2.3
DDR48YMR173W DCV1P43595 202 aa0.71□□□□□ -2.3
DDR48YMR173W YDR476CQ03362 224 aa0.71□□□□□ -2.3
DDR48YMR173W LIP1Q03579 150 aa0.71□□□□□ -2.3
DDR48YMR173W YDR102CQ03864 110 aa0.71□□□□□ -2.3
DDR48YMR173W HRD1Q08109 551 aa0.71□□□□□ -2.3
DDR48YMR173W YDL157CQ12082 118 aa0.71□□□□□ -2.3
DDR48YMR173W NSL1Q12143 216 aa0.71□□□□□ -2.3
DDR48YMR173W RPS25AQ3E792 108 aaPredicted RBP0.71□□□□□ -2.3
DDR48YMR173W ATP5P09457 212 aa0.7□□□□□ -2.3
DDR48YMR173W PBI2P0CT04 75 aaKnown RBP0.7□□□□□ -2.3
DDR48YMR173W YCL042WP25572 119 aa0.7□□□□□ -2.3
DDR48YMR173W SHB17P36136 271 aaKnown RBP0.7□□□□□ -2.3
DDR48YMR173W YKR070WP36151 352 aaKnown RBP0.7□□□□□ -2.3
DDR48YMR173W YPT31P38555 223 aaKnown RBP0.7□□□□□ -2.3
DDR48YMR173W YEL028WP39989 153 aa0.7□□□□□ -2.3
DDR48YMR173W GLC8P41818 229 aa0.7□□□□□ -2.3
DDR48YMR173W APS3P47064 194 aa0.7□□□□□ -2.3
DDR48YMR173W VMA10P48836 114 aaKnown RBP0.7□□□□□ -2.3
DDR48YMR173W SOL1P50278 321 aa0.7□□□□□ -2.3
DDR48YMR173W YDC1Q02896 317 aa0.7□□□□□ -2.3
DDR48YMR173W ELP6Q04868 273 aa0.7□□□□□ -2.3
DDR48YMR173W EFG1Q3E705 233 aaKnown RBP0.7□□□□□ -2.3
DDR48YMR173W UBI4P0CG63 381 aaKnown RBP0.69□□□□□ -2.3
DDR48YMR173W INO4P13902 151 aa0.69□□□□□ -2.3
DDR48YMR173W CPR5P35176 225 aa0.69□□□□□ -2.3
DDR48YMR173W AME1P38313 324 aa0.69□□□□□ -2.3
DDR48YMR173W YHL037CP38733 133 aa0.69□□□□□ -2.3
DDR48YMR173W YER121WP40076 114 aa0.69□□□□□ -2.3
DDR48YMR173W YJR015WP47090 510 aa0.69□□□□□ -2.3
DDR48YMR173W LSM3P57743 89 aaKnown RBP0.69□□□□□ -2.3
DDR48YMR173W TLG1Q03322 224 aa0.69□□□□□ -2.3
DDR48YMR173W FIT1Q04433 528 aa0.69□□□□□ -2.3
DDR48YMR173W YPR114WQ06107 315 aa0.69□□□□□ -2.3
DDR48YMR173W KEI1Q06346 221 aa0.69□□□□□ -2.3
DDR48YMR173W UIP4Q08926 304 aa0.69□□□□□ -2.3
DDR48YMR173W GRE1Q08969 168 aa0.69□□□□□ -2.3
DDR48YMR173W SLH1P53327 1967 aaKnown RBP0.68□□□□□ -2.3
DDR48YMR173W UGX2P32772 223 aa0.68□□□□□ -2.3
DDR48YMR173W PTC1P35182 281 aa0.68□□□□□ -2.3
DDR48YMR173W CSH1P38287 376 aa0.68□□□□□ -2.3
DDR48YMR173W HTD2P38790 280 aaKnown RBP0.68□□□□□ -2.3
DDR48YMR173W YIL102CP40488 101 aa0.68□□□□□ -2.3
DDR48YMR173W APQ12P40532 138 aa0.68□□□□□ -2.3
DDR48YMR173W GEP7P53171 287 aa0.68□□□□□ -2.3
DDR48YMR173W YNR064CP53750 290 aa0.68□□□□□ -2.3
DDR48YMR173W ATP19P81451 68 aa0.68□□□□□ -2.3
DDR48YMR173W YLR046CQ12253 270 aa0.68□□□□□ -2.3
DDR48YMR173W YLR422WQ06409 1932 aa0.68□□□□□ -2.3
DDR48YMR173W KIN28P06242 306 aa0.67□□□□□ -2.3
DDR48YMR173W CIN5P40917 295 aa0.67□□□□□ -2.3
DDR48YMR173W CCW12Q12127 133 aa0.67□□□□□ -2.3
DDR48YMR173W FMP49A0A023PZB3 126 aa0.66□□□□□ -2.3
DDR48YMR173W RPS28BP0C0X0 67 aaKnown RBP0.66□□□□□ -2.3
DDR48YMR173W RPL30P14120 105 aaKnown RBP0.66□□□□□ -2.3
DDR48YMR173W PEX34P25584 144 aa0.66□□□□□ -2.3
DDR48YMR173W BUB2P26448 306 aaPredicted RBP0.66□□□□□ -2.3
DDR48YMR173W SPT14P32363 452 aa0.66□□□□□ -2.3
DDR48YMR173W ECM31P38122 312 aa0.66□□□□□ -2.3
DDR48YMR173W DER1P38307 211 aa0.66□□□□□ -2.3
DDR48YMR173W YAR064WP39563 99 aa0.66□□□□□ -2.3
DDR48YMR173W YER181CP40097 107 aa0.66□□□□□ -2.3
DDR48YMR173W YFL051CP43552 160 aa0.66□□□□□ -2.3
DDR48YMR173W CCC1P47818 322 aa0.66□□□□□ -2.3
DDR48YMR173W ORM1P53224 222 aa0.66□□□□□ -2.3
DDR48YMR173W NMA1Q06178 401 aaKnown RBP0.66□□□□□ -2.3
DDR48YMR173W RPS28AQ3E7X9 67 aaPredicted RBP0.66□□□□□ -2.3
DDR48YMR173W SRP21P32342 167 aa0.65□□□□□ -2.31
DDR48YMR173W FIG1P38224 298 aa0.65□□□□□ -2.31
DDR48YMR173W FIP1P45976 327 aa0.65□□□□□ -2.31
DDR48YMR173W TMA23Q03525 211 aa0.65□□□□□ -2.31
DDR48YMR173W FMN1Q03778 218 aa0.65□□□□□ -2.31
DDR48YMR173W YDL241WQ07738 123 aa0.65□□□□□ -2.31
DDR48YMR173W RRT7Q07829 113 aa0.65□□□□□ -2.31
DDR48YMR173W VAM10Q08474 114 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms