RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	TY4B-J	P47024	1803 aa		3.89	□□□□□ -1.79
SIS2	YKR072C	REP2	P03872	296 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	PRE7	P23724	241 aa	Known RBP	3.88	□□□□□ -1.79
SIS2	YKR072C	LHP1	P33399	275 aa	Known RBP	3.88	□□□□□ -1.79
SIS2	YKR072C	PTC1	P35182	281 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	PRE5	P40302	234 aa	Known RBP	3.88	□□□□□ -1.79
SIS2	YKR072C	YGR017W	P53210	297 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	YMR099C	Q03161	297 aa	Known RBP	3.88	□□□□□ -1.79
SIS2	YKR072C	YMR253C	Q04835	414 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	YPR114W	Q06107	315 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	SPC3	Q12133	184 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	PSF1	Q12488	208 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	YNL277W-A	Q3E7Z0	62 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.88	□□□□□ -1.79
SIS2	YKR072C	YAL067W-A	Q8TGK6	75 aa		3.88	□□□□□ -1.79
SIS2	YKR072C	RPB9	P27999	122 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	SNC2	P33328	115 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	FMP46	P36141	133 aa	Known RBP	3.87	□□□□□ -1.79
SIS2	YKR072C	GPI18	P38211	433 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	YFL019C	P43576	117 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	SPG3	Q04398	127 aa	Predicted RBP	3.87	□□□□□ -1.79
SIS2	YKR072C	BOL1	Q3E793	110 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	ATP15	P21306	62 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	YER134C	P40081	178 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	AIM11	P87275	137 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	YLR118C	Q12354	227 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	YCL001W-B	Q96VH2	84 aa		3.87	□□□□□ -1.79
SIS2	YKR072C	SGA1	P08019	549 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	NSP1	P14907	823 aa	Known RBP	3.86	□□□□□ -1.79
SIS2	YKR072C	YGL193C	P53097	103 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	APJ1	P53940	528 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	YNL033W	P53964	284 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	YNL019C	P53975	284 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	TMA23	Q03525	211 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	AIM36	Q03798	255 aa		3.86	□□□□□ -1.79
SIS2	YKR072C	SNF2	P22082	1703 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	DDI2	P0CH63	225 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	DDI3	P0CH64	225 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	PHO13	P19881	312 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	HYM1	P32464	399 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	SHB17	P36136	271 aa	Known RBP	3.85	□□□□□ -1.79
SIS2	YKR072C	RFS1	P38234	210 aa	Known RBP	3.85	□□□□□ -1.79
SIS2	YKR072C	ECM34	P38728	170 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	AIF1	P52923	378 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	NAT3	Q06504	195 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	TAD3	Q9URQ3	322 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	YRF1-3	P0CX14	1859 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	YRF1-7	P0CX15	1859 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	YRF1-6	P53819	1859 aa		3.85	□□□□□ -1.79
SIS2	YKR072C	RPL9A	P05738	191 aa	Known RBP	3.84	□□□□□ -1.79
SIS2	YKR072C	HIS3	P06633	220 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	CPA1	P07258	411 aa	Known RBP	3.84	□□□□□ -1.79
SIS2	YKR072C	PCL1	P24867	279 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	SPT14	P32363	452 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	YHR140W	P38842	239 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	YNL200C	P40165	246 aa	Known RBP	3.84	□□□□□ -1.79
SIS2	YKR072C	RPL9B	P51401	191 aa	Known RBP	3.84	□□□□□ -1.79
SIS2	YKR072C	ZEO1	Q08245	113 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	RTR2	Q12378	196 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	TOM1	Q03280	3268 aa		3.84	□□□□□ -1.79
SIS2	YKR072C	TOM40	P23644	387 aa	Known RBP	3.84	□□□□□ -1.8
SIS2	YKR072C	YHL026C	P38740	315 aa		3.84	□□□□□ -1.8
SIS2	YKR072C	SFT1	P43682	97 aa		3.84	□□□□□ -1.8
SIS2	YKR072C	DSK2	P48510	373 aa		3.84	□□□□□ -1.8
SIS2	YKR072C	YDR391C	Q04170	232 aa		3.84	□□□□□ -1.8
SIS2	YKR072C	MCH1	Q07376	486 aa		3.84	□□□□□ -1.8
SIS2	YKR072C	YBR298C-A	Q8TGK4	73 aa		3.84	□□□□□ -1.8
SIS2	YKR072C	FLO11	P08640	1367 aa		3.83	□□□□□ -1.8
SIS2	YKR072C	VTC1	P40046	129 aa	RIP-Chip data	3.83	□□□□□ -1.8	not detected
SIS2	YKR072C	ARC15	P40518	154 aa	RIP-Chip data	3.83	□□□□□ -1.8	not detected
SIS2	YKR072C	RPS12	P48589	143 aa	Known RBP	3.83	□□□□□ -1.8
SIS2	YKR072C	YML122C	Q03207	126 aa		3.83	□□□□□ -1.8
SIS2	YKR072C	SCW10	Q04951	389 aa		3.83	□□□□□ -1.8
SIS2	YKR072C	FCF2	Q12035	217 aa	Predicted RBP	3.83	□□□□□ -1.8
SIS2	YKR072C	ROM2	P51862	1356 aa	Known RBP	3.83	□□□□□ -1.8
SIS2	YKR072C	YAR023C	D6VPM8	179 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	TIM9	O74700	87 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	COX10	P21592	462 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	YBL010C	P32788	280 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	YBR220C	P38318	560 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	TRS20	P38334	175 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	HTD2	P38790	280 aa	Known RBP	3.82	□□□□□ -1.8
SIS2	YKR072C	YHR125W	P38831	101 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	YJL218W	P40892	196 aa	Known RBP	3.82	□□□□□ -1.8
SIS2	YKR072C	VPS28	Q02767	242 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	ODC2	Q99297	307 aa		3.82	□□□□□ -1.8
SIS2	YKR072C	COX4	P04037	155 aa		3.81	□□□□□ -1.8
SIS2	YKR072C	SWD3	P38123	315 aa		3.81	□□□□□ -1.8
SIS2	YKR072C	RSM10	Q03201	203 aa		3.81	□□□□□ -1.8
SIS2	YKR072C	ADK1	P07170	222 aa	Known RBP	3.81	□□□□□ -1.8
SIS2	YKR072C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.81	□□□□□ -1.8	not detected
SIS2	YKR072C	FYV4	P38783	130 aa	Predicted RBP	3.81	□□□□□ -1.8
SIS2	YKR072C	BUD25	P85052	153 aa		3.81	□□□□□ -1.8
SIS2	YKR072C	AHT1	P29589	182 aa		3.8	□□□□□ -1.8
SIS2	YKR072C	RPL14A	P36105	138 aa	Known RBP	3.8	□□□□□ -1.8
SIS2	YKR072C	MRPL27	P36526	146 aa	Predicted RBP	3.8	□□□□□ -1.8
SIS2	YKR072C	YBR242W	P38331	238 aa		3.8	□□□□□ -1.8
SIS2	YKR072C	RPL14B	P38754	138 aa	Known RBP	3.8	□□□□□ -1.8
SIS2	YKR072C	PAC10	P48363	199 aa		3.8	□□□□□ -1.8
SIS2	YKR072C	YDR274C	P87283	123 aa		3.8	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 63.1 ms