RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C YER188WP40103 239 aa4.42□□□□□ -1.7
DEF1YKL054C GON7P46984 123 aa4.42□□□□□ -1.7
DEF1YKL054C ELC1Q03071 99 aa4.42□□□□□ -1.7
DEF1YKL054C YMR230W-AQ3E7B5 62 aa4.42□□□□□ -1.7
DEF1YKL054C HIS3P06633 220 aa4.42□□□□□ -1.7
DEF1YKL054C YHR032W-AP0C5N6 59 aa4.42□□□□□ -1.7
DEF1YKL054C RPB11P38902 120 aa4.42□□□□□ -1.7
DEF1YKL054C SPC25P40014 221 aa4.42□□□□□ -1.7
DEF1YKL054C HUT1Q12520 339 aa4.42□□□□□ -1.7
DEF1YKL054C SPP41P38904 1435 aa4.41□□□□□ -1.7
DEF1YKL054C ANB1P19211 157 aa4.41□□□□□ -1.7
DEF1YKL054C MID2P36027 376 aa4.41□□□□□ -1.7
DEF1YKL054C RTR2Q12378 196 aa4.41□□□□□ -1.7
DEF1YKL054C RRT1P38192 103 aa4.41□□□□□ -1.7
DEF1YKL054C YPT31P38555 223 aaKnown RBP4.41□□□□□ -1.7
DEF1YKL054C MPM1P40364 252 aa4.41□□□□□ -1.7
DEF1YKL054C SBH1P52870 82 aa4.41□□□□□ -1.7
DEF1YKL054C PIN3Q06449 215 aa4.41□□□□□ -1.7
DEF1YKL054C YPR063CQ12160 140 aa4.41□□□□□ -1.7
DEF1YKL054C AUS1Q08409 1394 aa4.4□□□□□ -1.7
DEF1YKL054C GPA2P10823 449 aa4.4□□□□□ -1.7
DEF1YKL054C NOP1P15646 327 aaKnown RBP4.4□□□□□ -1.7
DEF1YKL054C MOB1P40484 314 aa4.4□□□□□ -1.7
DEF1YKL054C OCA6Q12454 224 aa4.4□□□□□ -1.7
DEF1YKL054C DUR1,2P32528 1835 aaKnown RBP4.4□□□□□ -1.71
DEF1YKL054C YOR062CP36025 268 aa4.4□□□□□ -1.71
DEF1YKL054C PHS1P40857 217 aa4.39□□□□□ -1.71
DEF1YKL054C HAL1Q01766 294 aa4.39□□□□□ -1.71
DEF1YKL054C MRPS8Q03799 155 aa4.39□□□□□ -1.71
DEF1YKL054C HSL1P34244 1518 aa4.39□□□□□ -1.71
DEF1YKL054C RAD6P06104 172 aa4.38□□□□□ -1.71
DEF1YKL054C DDP1Q99321 188 aaKnown RBP4.38□□□□□ -1.71
DEF1YKL054C YOL162WP0CF19 215 aa4.38□□□□□ -1.71
DEF1YKL054C DOC1P53068 250 aa4.38□□□□□ -1.71
DEF1YKL054C YOR381W-AQ3E804 55 aa4.38□□□□□ -1.71
DEF1YKL054C YOR376W-AQ3E805 51 aa4.38□□□□□ -1.71
DEF1YKL054C YCR050CP25630 102 aa4.37□□□□□ -1.71
DEF1YKL054C DIE2P50076 525 aa4.37□□□□□ -1.71
DEF1YKL054C EMC4P53073 190 aa4.37□□□□□ -1.71
DEF1YKL054C YMR252CQ04814 134 aa4.37□□□□□ -1.71
DEF1YKL054C SAS5Q99314 248 aa4.37□□□□□ -1.71
DEF1YKL054C UBR1P19812 1950 aa4.37□□□□□ -1.71
DEF1YKL054C YAR029WP39549 74 aa4.36□□□□□ -1.71
DEF1YKL054C YEL073CP39974 107 aa4.36□□□□□ -1.71
DEF1YKL054C GAT4P40569 121 aa4.36□□□□□ -1.71
DEF1YKL054C YAE1P47118 141 aaPredicted RBP4.36□□□□□ -1.71
DEF1YKL054C YGL230CP53074 147 aa4.36□□□□□ -1.71
DEF1YKL054C YGR026WP53217 278 aa4.36□□□□□ -1.71
DEF1YKL054C YNR064CP53750 290 aa4.36□□□□□ -1.71
DEF1YKL054C YKL068W-AQ3E826 78 aa4.36□□□□□ -1.71
DEF1YKL054C TRM3Q07527 1436 aa4.35□□□□□ -1.71
DEF1YKL054C HAP2P06774 265 aa4.35□□□□□ -1.71
DEF1YKL054C CUP9P41817 306 aa4.35□□□□□ -1.71
DEF1YKL054C SHH3Q04487 196 aa4.35□□□□□ -1.71
DEF1YKL054C CSI2Q08054 341 aa4.35□□□□□ -1.71
DEF1YKL054C KTI11Q3E840 82 aa4.35□□□□□ -1.71
DEF1YKL054C TSC11P40061 1430 aa4.35□□□□□ -1.71
DEF1YKL054C SRL3P36167 246 aa4.34□□□□□ -1.71
DEF1YKL054C YPI1P43587 155 aa4.34□□□□□ -1.71
DEF1YKL054C BAT2P47176 376 aaKnown RBP4.34□□□□□ -1.71
DEF1YKL054C TY1B-HO13535 1793 aa4.34□□□□□ -1.71
DEF1YKL054C MDH2P22133 377 aa4.34□□□□□ -1.72
DEF1YKL054C PAM17P36147 197 aa4.34□□□□□ -1.72
DEF1YKL054C YHR180WP38868 163 aa4.34□□□□□ -1.72
DEF1YKL054C YAL064WP39711 94 aa4.34□□□□□ -1.72
DEF1YKL054C FAS1P07149 2051 aaKnown RBP4.33□□□□□ -1.72
DEF1YKL054C TVP23P38962 199 aa4.33□□□□□ -1.72
DEF1YKL054C YNL217WP40152 326 aa4.33□□□□□ -1.72
DEF1YKL054C FKS1P38631 1876 aaKnown RBP4.33□□□□□ -1.72
DEF1YKL054C YMR295CQ03559 197 aa4.33□□□□□ -1.72
DEF1YKL054C LIP1Q03579 150 aa4.33□□□□□ -1.72
DEF1YKL054C ATG10Q07879 167 aa4.33□□□□□ -1.72
DEF1YKL054C SCS22Q6Q595 175 aa4.33□□□□□ -1.72
DEF1YKL054C MSW1P04803 379 aa4.32□□□□□ -1.72
DEF1YKL054C FZF1P32805 299 aa4.32□□□□□ -1.72
DEF1YKL054C SFT2P38166 215 aa4.32□□□□□ -1.72
DEF1YKL054C PIR5P46999 287 aa4.32□□□□□ -1.72
DEF1YKL054C MYO2P19524 1574 aaKnown RBP4.32□□□□□ -1.72
DEF1YKL054C YHL042WP38729 150 aa4.31□□□□□ -1.72
DEF1YKL054C RIM9Q04734 239 aa4.31□□□□□ -1.72
DEF1YKL054C YNR077CP53758 84 aa4.31□□□□□ -1.72
DEF1YKL054C SDH4P37298 181 aa4.3□□□□□ -1.72
DEF1YKL054C YOR015WQ12169 119 aa4.3□□□□□ -1.72
DEF1YKL054C MIG1P27705 504 aa4.3□□□□□ -1.72
DEF1YKL054C GAA1P39012 614 aa4.3□□□□□ -1.72
DEF1YKL054C PAM16P42949 149 aa4.3□□□□□ -1.72
DEF1YKL054C DML1Q03652 475 aa4.3□□□□□ -1.72
DEF1YKL054C RPS19AP07280 144 aaKnown RBP4.29□□□□□ -1.72
DEF1YKL054C RPS19BP07281 144 aaPredicted RBP4.29□□□□□ -1.72
DEF1YKL054C RIO2P40160 425 aaKnown RBP4.29□□□□□ -1.72
DEF1YKL054C RRT7Q07829 113 aa4.29□□□□□ -1.72
DEF1YKL054C YKR032WP36127 104 aa4.29□□□□□ -1.72
DEF1YKL054C IRC23Q08416 157 aa4.29□□□□□ -1.72
DEF1YKL054C MRPL15P36523 253 aa4.28□□□□□ -1.72
DEF1YKL054C YBR242WP38331 238 aa4.28□□□□□ -1.72
DEF1YKL054C NSE4P43124 402 aa4.28□□□□□ -1.72
DEF1YKL054C SAY1P53324 424 aa4.28□□□□□ -1.72
DEF1YKL054C UPS1Q05776 175 aa4.27□□□□□ -1.73
DEF1YKL054C YOR097CQ12274 175 aaPredicted RBP4.27□□□□□ -1.73
DEF1YKL054C YLR422WQ06409 1932 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 40 ms