RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W UPS3Q04006 179 aa2.08□□□□□ -2.08
SNX4YJL036W YOR015WQ12169 119 aa2.08□□□□□ -2.08
SNX4YJL036W BOL1Q3E793 110 aa2.08□□□□□ -2.08
SNX4YJL036W FLO9P39712 1322 aa2.08□□□□□ -2.08
SNX4YJL036W PHO13P19881 312 aa2.07□□□□□ -2.08
SNX4YJL036W TMA19P35691 167 aaKnown RBP2.07□□□□□ -2.08
SNX4YJL036W YEL073CP39974 107 aa2.07□□□□□ -2.08
SNX4YJL036W YJL218WP40892 196 aaKnown RBP2.07□□□□□ -2.08
SNX4YJL036W HHO1P53551 258 aa2.07□□□□□ -2.08
SNX4YJL036W YNR064CP53750 290 aa2.07□□□□□ -2.08
SNX4YJL036W DML1Q03652 475 aa2.07□□□□□ -2.08
SNX4YJL036W RIM9Q04734 239 aa2.07□□□□□ -2.08
SNX4YJL036W YMR320WQ04897 101 aa2.07□□□□□ -2.08
SNX4YJL036W YOR381W-AQ3E804 55 aa2.07□□□□□ -2.08
SNX4YJL036W RIB3Q99258 208 aa2.07□□□□□ -2.08
SNX4YJL036W SPA2P23201 1466 aaKnown RBP2.07□□□□□ -2.08
SNX4YJL036W FAS1P07149 2051 aaKnown RBP2.06□□□□□ -2.08
SNX4YJL036W COX8P04039 78 aa2.06□□□□□ -2.08
SNX4YJL036W SPT14P32363 452 aa2.06□□□□□ -2.08
SNX4YJL036W THG1P53215 237 aaKnown RBP2.06□□□□□ -2.08
SNX4YJL036W DAD4P69851 72 aa2.06□□□□□ -2.08
SNX4YJL036W UIP4Q08926 304 aa2.06□□□□□ -2.08
SNX4YJL036W ATG41Q12048 136 aa2.06□□□□□ -2.08
SNX4YJL036W PST2Q12335 198 aaKnown RBP2.06□□□□□ -2.08
SNX4YJL036W YKR045CP36138 183 aa2.05□□□□□ -2.08
SNX4YJL036W AYR1P40471 297 aa2.05□□□□□ -2.08
SNX4YJL036W MOB1P40484 314 aa2.05□□□□□ -2.08
SNX4YJL036W PHB1P40961 287 aa2.05□□□□□ -2.08
SNX4YJL036W NSE4P43124 402 aa2.05□□□□□ -2.08
SNX4YJL036W GPI2P46961 280 aa2.05□□□□□ -2.08
SNX4YJL036W YDR366CP87287 132 aa2.05□□□□□ -2.08
SNX4YJL036W COF1Q03048 143 aaKnown RBP2.05□□□□□ -2.08
SNX4YJL036W YDR102CQ03864 110 aa2.05□□□□□ -2.08
SNX4YJL036W CSN9Q03981 162 aa2.05□□□□□ -2.08
SNX4YJL036W UPS1Q05776 175 aa2.05□□□□□ -2.08
SNX4YJL036W YHR007C-AQ07074 71 aa2.05□□□□□ -2.08
SNX4YJL036W SRP21P32342 167 aa2.04□□□□□ -2.08
SNX4YJL036W YRA2P36036 203 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
SNX4YJL036W MRPL24P36525 258 aaPredicted RBP2.04□□□□□ -2.08
SNX4YJL036W FIT2Q08906 153 aa2.04□□□□□ -2.08
SNX4YJL036W YLR361C-AQ3E795 98 aa2.04□□□□□ -2.08
SNX4YJL036W MDM35O60200 86 aa2.03□□□□□ -2.08
SNX4YJL036W YOL162WP0CF19 215 aa2.03□□□□□ -2.08
SNX4YJL036W GPA2P10823 449 aa2.03□□□□□ -2.08
SNX4YJL036W STF2P16965 84 aa2.03□□□□□ -2.08
SNX4YJL036W RPC19P28000 142 aaKnown RBP2.03□□□□□ -2.08
SNX4YJL036W SUA7P29055 345 aaPredicted RBP2.03□□□□□ -2.08
SNX4YJL036W YBR219CP38317 127 aa2.03□□□□□ -2.08
SNX4YJL036W PAC10P48363 199 aa2.03□□□□□ -2.08
SNX4YJL036W YGR039WP53225 103 aa2.03□□□□□ -2.08
SNX4YJL036W UBC7Q02159 165 aa2.03□□□□□ -2.08
SNX4YJL036W EST3Q03096 181 aa2.03□□□□□ -2.08
SNX4YJL036W YML079WQ03629 201 aa2.03□□□□□ -2.08
SNX4YJL036W YPR114WQ06107 315 aa2.03□□□□□ -2.08
SNX4YJL036W ATG10Q07879 167 aa2.03□□□□□ -2.08
SNX4YJL036W SUI1P32911 108 aaKnown RBP2.02□□□□□ -2.09
SNX4YJL036W YPT31P38555 223 aaKnown RBP2.02□□□□□ -2.09
SNX4YJL036W YEL067CP39978 195 aa2.02□□□□□ -2.09
SNX4YJL036W ALB1P47019 175 aaPredicted RBP2.02□□□□□ -2.09
SNX4YJL036W FMN1Q03778 218 aa2.02□□□□□ -2.09
SNX4YJL036W YHP1Q04116 353 aa2.02□□□□□ -2.09
SNX4YJL036W RRT7Q07829 113 aa2.02□□□□□ -2.09
SNX4YJL036W SPC3Q12133 184 aa2.02□□□□□ -2.09
SNX4YJL036W HSP12P22943 109 aaKnown RBP2.01□□□□□ -2.09
SNX4YJL036W PRS3P38689 320 aaKnown RBP2.01□□□□□ -2.09
SNX4YJL036W YGR269WP40326 108 aa2.01□□□□□ -2.09
SNX4YJL036W ADE6P38972 1358 aaKnown RBP2□□□□□ -2.09
SNX4YJL036W MRS4P23500 304 aa2□□□□□ -2.09
SNX4YJL036W CCS1P40202 249 aaKnown RBP2□□□□□ -2.09
SNX4YJL036W DYN2Q02647 92 aa2□□□□□ -2.09
SNX4YJL036W YDR278CQ05612 105 aa2□□□□□ -2.09
SNX4YJL036W RFU1Q08003 200 aa2□□□□□ -2.09
SNX4YJL036W INO4P13902 151 aa1.99□□□□□ -2.09
SNX4YJL036W MAK31P23059 88 aa1.99□□□□□ -2.09
SNX4YJL036W AHT1P29589 182 aa1.99□□□□□ -2.09
SNX4YJL036W MPM1P40364 252 aa1.99□□□□□ -2.09
SNX4YJL036W YLR162WQ06235 118 aa1.99□□□□□ -2.09
SNX4YJL036W YDL157CQ12082 118 aa1.99□□□□□ -2.09
SNX4YJL036W FCY1Q12178 158 aa1.99□□□□□ -2.09
SNX4YJL036W YMR030W-AQ3E760 96 aa1.99□□□□□ -2.09
SNX4YJL036W SPS2P08459 502 aa1.98□□□□□ -2.09
SNX4YJL036W QCR8P08525 94 aa1.98□□□□□ -2.09
SNX4YJL036W NHP6AP11632 93 aaKnown RBP1.98□□□□□ -2.09
SNX4YJL036W SEN2P16658 377 aa1.98□□□□□ -2.09
SNX4YJL036W DDR48P18899 430 aaKnown RBP1.98□□□□□ -2.09
SNX4YJL036W CIN5P40917 295 aa1.98□□□□□ -2.09
SNX4YJL036W GEP7P53171 287 aa1.98□□□□□ -2.09
SNX4YJL036W ATP19P81451 68 aa1.98□□□□□ -2.09
SNX4YJL036W YDL241WQ07738 123 aa1.98□□□□□ -2.09
SNX4YJL036W CSI2Q08054 341 aa1.98□□□□□ -2.09
SNX4YJL036W UBR1P19812 1950 aa1.98□□□□□ -2.09
SNX4YJL036W RPB7P34087 171 aa1.97□□□□□ -2.09
SNX4YJL036W SHB17P36136 271 aaKnown RBP1.97□□□□□ -2.09
SNX4YJL036W YHR140WP38842 239 aa1.97□□□□□ -2.09
SNX4YJL036W TIM8P57744 87 aa1.97□□□□□ -2.09
SNX4YJL036W ELP6Q04868 273 aa1.97□□□□□ -2.09
SNX4YJL036W ATP14Q12349 124 aa1.97□□□□□ -2.09
SNX4YJL036W YBL010CP32788 280 aa1.96□□□□□ -2.1
SNX4YJL036W RPS20P38701 121 aaKnown RBP1.96□□□□□ -2.1
SNX4YJL036W HPA3P39979 161 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms