RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C SOD1P00445 154 aaKnown RBP7.33□□□□□ -1.24
SSL2YIL143C MRS3P10566 314 aa7.33□□□□□ -1.24
SSL2YIL143C CUP2P15315 225 aa7.33□□□□□ -1.24
SSL2YIL143C YJL028WP47062 111 aa7.33□□□□□ -1.24
SSL2YIL143C UPS1Q05776 175 aa7.33□□□□□ -1.24
SSL2YIL143C RAF1Q06891 181 aa7.33□□□□□ -1.24
SSL2YIL143C YMR316C-AI2HB70 103 aa7.33□□□□□ -1.24
SSL2YIL143C REC104P33323 182 aa7.33□□□□□ -1.24
SSL2YIL143C DOG1P38774 246 aa7.33□□□□□ -1.24
SSL2YIL143C HSK3P69852 69 aa7.33□□□□□ -1.24
SSL2YIL143C ROX3P25046 220 aa7.32□□□□□ -1.24
SSL2YIL143C PAU16P35994 123 aa7.32□□□□□ -1.24
SSL2YIL143C ERF2Q06551 359 aa7.32□□□□□ -1.24
SSL2YIL143C DAP1Q12091 152 aa7.32□□□□□ -1.24
SSL2YIL143C MRPS5P33759 307 aa7.32□□□□□ -1.24
SSL2YIL143C YKL187CP34231 750 aa7.32□□□□□ -1.24
SSL2YIL143C ELF1P36053 145 aa7.32□□□□□ -1.24
SSL2YIL143C RPA43P46669 326 aa7.32□□□□□ -1.24
SSL2YIL143C BOR1P53838 576 aa7.32□□□□□ -1.24
SSL2YIL143C YMR166CQ03829 368 aa7.32□□□□□ -1.24
SSL2YIL143C YPR098CQ06089 161 aa7.32□□□□□ -1.24
SSL2YIL143C YDL157CQ12082 118 aa7.32□□□□□ -1.24
SSL2YIL143C ERG8P24521 451 aa7.31□□□□□ -1.24
SSL2YIL143C SRP21P32342 167 aa7.31□□□□□ -1.24
SSL2YIL143C YHR138CP38841 114 aaPredicted RBP7.31□□□□□ -1.24
SSL2YIL143C PRE5P40302 234 aaKnown RBP7.31□□□□□ -1.24
SSL2YIL143C MIC27P50945 234 aa7.31□□□□□ -1.24
SSL2YIL143C CPD1P53314 239 aa7.31□□□□□ -1.24
SSL2YIL143C YHP1Q04116 353 aa7.31□□□□□ -1.24
SSL2YIL143C YLR302CO13544 120 aa7.31□□□□□ -1.24
SSL2YIL143C YKL102CP34249 101 aa7.31□□□□□ -1.24
SSL2YIL143C TEM1P38987 245 aa7.31□□□□□ -1.24
SSL2YIL143C TVP18Q04767 167 aa7.31□□□□□ -1.24
SSL2YIL143C CSM4Q08955 156 aa7.31□□□□□ -1.24
SSL2YIL143C ECO1P43605 281 aa7.3□□□□□ -1.24
SSL2YIL143C YGR151CP53287 111 aa7.3□□□□□ -1.24
SSL2YIL143C YDR366CP87287 132 aa7.3□□□□□ -1.24
SSL2YIL143C YER188WP40103 239 aa7.3□□□□□ -1.24
SSL2YIL143C EGT2P42835 1041 aa7.3□□□□□ -1.24
SSL2YIL143C YDR114CQ04597 100 aa7.3□□□□□ -1.24
SSL2YIL143C TRI1Q05024 226 aa7.3□□□□□ -1.24
SSL2YIL143C PAU23Q07987 124 aa7.3□□□□□ -1.24
SSL2YIL143C PAU17Q12370 124 aa7.3□□□□□ -1.24
SSL2YIL143C GEP3Q08622 556 aa7.29□□□□□ -1.24
SSL2YIL143C YPS3Q12303 508 aa7.29□□□□□ -1.24
SSL2YIL143C SEC4P07560 215 aaKnown RBP7.29□□□□□ -1.24
SSL2YIL143C UTR5P32630 166 aa7.29□□□□□ -1.24
SSL2YIL143C GSP1P32835 219 aaKnown RBP7.29□□□□□ -1.24
SSL2YIL143C GSP2P32836 220 aaKnown RBP7.29□□□□□ -1.24
SSL2YIL143C MTC6P38849 526 aa7.29□□□□□ -1.24
SSL2YIL143C SEC24P40482 926 aaKnown RBP7.29□□□□□ -1.24
SSL2YIL143C YDR391CQ04170 232 aa7.29□□□□□ -1.24
SSL2YIL143C POS5Q06892 414 aa7.29□□□□□ -1.24
SSL2YIL143C SSU72P53538 206 aaPredicted RBP7.28□□□□□ -1.24
SSL2YIL143C RPS22BQ3E7Y3 130 aaKnown RBP7.28□□□□□ -1.24
SSL2YIL143C SCS22Q6Q595 175 aa7.28□□□□□ -1.24
SSL2YIL143C RPL7AP05737 244 aaKnown RBP7.28□□□□□ -1.24
SSL2YIL143C HUA1P40325 198 aa7.28□□□□□ -1.24
SSL2YIL143C TDA4P47153 279 aa7.28□□□□□ -1.24
SSL2YIL143C LPP1Q04396 274 aa7.28□□□□□ -1.24
SSL2YIL143C RPL7BQ12213 244 aaKnown RBP7.28□□□□□ -1.24
SSL2YIL143C QRI5P32344 111 aa7.27□□□□□ -1.25
SSL2YIL143C NUP53Q03790 475 aa7.27□□□□□ -1.25
SSL2YIL143C YGL258W-AQ3E740 77 aa7.27□□□□□ -1.25
SSL2YIL143C NNK1P36003 928 aa7.27□□□□□ -1.25
SSL2YIL143C YER084WP40057 128 aa7.27□□□□□ -1.25
SSL2YIL143C YJL163CP46996 555 aa7.27□□□□□ -1.25
SSL2YIL143C YIP3P53633 176 aa7.27□□□□□ -1.25
SSL2YIL143C RUB1Q03919 77 aa7.27□□□□□ -1.25
SSL2YIL143C RFM1Q12192 310 aa7.27□□□□□ -1.25
SSL2YIL143C COX2P00410 251 aa7.26□□□□□ -1.25
SSL2YIL143C SGN1P40561 250 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
SSL2YIL143C UBC13P52490 153 aa7.26□□□□□ -1.25
SSL2YIL143C CNL1Q06333 122 aa7.26□□□□□ -1.25
SSL2YIL143C RRS1Q08746 203 aaKnown RBP7.26□□□□□ -1.25
SSL2YIL143C RKI1Q12189 258 aa7.26□□□□□ -1.25
SSL2YIL143C YOR032W-AQ8TGS1 66 aa7.26□□□□□ -1.25
SSL2YIL143C YBR126W-AQ8TGU7 68 aa7.26□□□□□ -1.25
SSL2YIL143C YPT1P01123 206 aaKnown RBP7.26□□□□□ -1.25
SSL2YIL143C RAD23P32628 398 aaKnown RBP7.26□□□□□ -1.25
SSL2YIL143C ZRT1P32804 376 aa7.26□□□□□ -1.25
SSL2YIL143C AIM29P36154 155 aa7.26□□□□□ -1.25
SSL2YIL143C THG1P53215 237 aaKnown RBP7.26□□□□□ -1.25
SSL2YIL143C API2Q04413 109 aa7.26□□□□□ -1.25
SSL2YIL143C YOS1Q3E834 85 aa7.26□□□□□ -1.25
SSL2YIL143C YER190C-BP0CX94 160 aa7.25□□□□□ -1.25
SSL2YIL143C YEL077W-AP0CX95 160 aa7.25□□□□□ -1.25
SSL2YIL143C YGR296C-BP0CX96 160 aa7.25□□□□□ -1.25
SSL2YIL143C YPL283W-BP0CX97 160 aa7.25□□□□□ -1.25
SSL2YIL143C YPR204C-AP0CX98 160 aa7.25□□□□□ -1.25
SSL2YIL143C YMR31P19955 123 aa7.25□□□□□ -1.25
SSL2YIL143C UME6P39001 836 aa7.25□□□□□ -1.25
SSL2YIL143C YNR071CP53757 342 aa7.25□□□□□ -1.25
SSL2YIL143C UPS3Q04006 179 aa7.25□□□□□ -1.25
SSL2YIL143C HMRA1P0CY11 126 aa7.24□□□□□ -1.25
SSL2YIL143C SEC72P39742 193 aaKnown RBP7.24□□□□□ -1.25
SSL2YIL143C CIN5P40917 295 aa7.24□□□□□ -1.25
SSL2YIL143C HAC1P41546 238 aa7.24□□□□□ -1.25
SSL2YIL143C SDS23P53172 527 aa7.24□□□□□ -1.25
SSL2YIL143C RAV2Q03956 351 aa7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms