RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YFL015CP43578 164 aa5.38□□□□□ -1.55
YPT1YFL038C YOR105WQ08504 108 aa5.38□□□□□ -1.55
YPT1YFL038C YIL134C-AQ45U18 67 aa5.38□□□□□ -1.55
YPT1YFL038C TOR2P32600 2474 aaKnown RBP5.38□□□□□ -1.55
YPT1YFL038C YMR316C-AI2HB70 103 aa5.37□□□□□ -1.55
YPT1YFL038C RPL39P04650 51 aa5.37□□□□□ -1.55
YPT1YFL038C POR1P04840 283 aaKnown RBP5.37□□□□□ -1.55
YPT1YFL038C ILV5P06168 395 aaKnown RBP5.37□□□□□ -1.55
YPT1YFL038C PIS1P06197 220 aaKnown RBP5.37□□□□□ -1.55
YPT1YFL038C FUN14P18411 198 aa5.37□□□□□ -1.55
YPT1YFL038C DAD2P36162 133 aa5.37□□□□□ -1.55
YPT1YFL038C CSH1P38287 376 aa5.37□□□□□ -1.55
YPT1YFL038C YNL046WP53956 172 aa5.37□□□□□ -1.55
YPT1YFL038C YHP1Q04116 353 aa5.37□□□□□ -1.55
YPT1YFL038C YOR029WQ12243 111 aa5.37□□□□□ -1.55
YPT1YFL038C GEP5Q12393 293 aa5.37□□□□□ -1.55
YPT1YFL038C YHR173CP38864 112 aa5.36□□□□□ -1.55
YPT1YFL038C RPB11P38902 120 aa5.36□□□□□ -1.55
YPT1YFL038C YIL163CP40448 117 aa5.36□□□□□ -1.55
YPT1YFL038C TMA10Q06177 86 aa5.36□□□□□ -1.55
YPT1YFL038C YPL278CQ08990 100 aa5.36□□□□□ -1.55
YPT1YFL038C HTB1P02293 131 aaKnown RBP5.35□□□□□ -1.55
YPT1YFL038C HMRA1P0CY11 126 aa5.35□□□□□ -1.55
YPT1YFL038C HSP12P22943 109 aaKnown RBP5.35□□□□□ -1.55
YPT1YFL038C RPS2P25443 254 aaKnown RBP5.35□□□□□ -1.55
YPT1YFL038C QRI5P32344 111 aa5.35□□□□□ -1.55
YPT1YFL038C NNK1P36003 928 aa5.35□□□□□ -1.55
YPT1YFL038C PHD1P36093 366 aa5.35□□□□□ -1.55
YPT1YFL038C MRPL11P36521 249 aaPredicted RBP5.35□□□□□ -1.55
YPT1YFL038C BDH1P39714 382 aa5.35□□□□□ -1.55
YPT1YFL038C BNA2P47125 453 aa5.35□□□□□ -1.55
YPT1YFL038C YTH1Q06102 208 aaPredicted RBP5.35□□□□□ -1.55
YPT1YFL038C ARR2Q06597 130 aa5.35□□□□□ -1.55
YPT1YFL038C YDL218WQ07629 317 aa5.35□□□□□ -1.55
YPT1YFL038C COX17Q12287 69 aa5.35□□□□□ -1.55
YPT1YFL038C ERG27Q12452 347 aaKnown RBP5.35□□□□□ -1.55
YPT1YFL038C DAL80P26343 269 aa5.34□□□□□ -1.55
YPT1YFL038C YKL102CP34249 101 aa5.34□□□□□ -1.55
YPT1YFL038C YBL071CP38185 102 aa5.34□□□□□ -1.55
YPT1YFL038C PRE3P38624 215 aa5.34□□□□□ -1.55
YPT1YFL038C SGN1P40561 250 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
YPT1YFL038C AIM24P47127 394 aa5.34□□□□□ -1.55
YPT1YFL038C ATP19P81451 68 aa5.34□□□□□ -1.55
YPT1YFL038C SED1Q01589 338 aa5.34□□□□□ -1.55
YPT1YFL038C ATX2Q12067 313 aa5.34□□□□□ -1.55
YPT1YFL038C FYV7Q12247 151 aa5.34□□□□□ -1.55
YPT1YFL038C RPS22BQ3E7Y3 130 aaKnown RBP5.34□□□□□ -1.55
YPT1YFL038C SOD1P00445 154 aaKnown RBP5.33□□□□□ -1.56
YPT1YFL038C TIR1P10863 254 aa5.33□□□□□ -1.56
YPT1YFL038C YCR022CP25620 114 aa5.33□□□□□ -1.56
YPT1YFL038C TCA17P32613 152 aa5.33□□□□□ -1.56
YPT1YFL038C ADH5P38113 351 aaKnown RBP5.33□□□□□ -1.56
YPT1YFL038C YIL077CP40508 320 aa5.33□□□□□ -1.56
YPT1YFL038C YFL054CP43549 646 aa5.33□□□□□ -1.56
YPT1YFL038C YGR018CP53211 109 aa5.33□□□□□ -1.56
YPT1YFL038C MRX11Q03079 207 aa5.33□□□□□ -1.56
YPT1YFL038C FIT2Q08906 153 aa5.33□□□□□ -1.56
YPT1YFL038C DFR1P07807 211 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
YPT1YFL038C PMU1P36069 295 aa5.32□□□□□ -1.56
YPT1YFL038C MIX23P38162 196 aa5.32□□□□□ -1.56
YPT1YFL038C DOG2P38773 246 aa5.32□□□□□ -1.56
YPT1YFL038C DOG1P38774 246 aa5.32□□□□□ -1.56
YPT1YFL038C CTR2P38865 189 aa5.32□□□□□ -1.56
YPT1YFL038C LST8P41318 303 aa5.32□□□□□ -1.56
YPT1YFL038C YNR071CP53757 342 aa5.32□□□□□ -1.56
YPT1YFL038C STD1Q02794 444 aa5.32□□□□□ -1.56
YPT1YFL038C IZH1Q03419 316 aa5.32□□□□□ -1.56
YPT1YFL038C MIX17Q03667 156 aa5.32□□□□□ -1.56
YPT1YFL038C YDL085C-AQ3E7B7 68 aaKnown RBP5.32□□□□□ -1.56
YPT1YFL038C YCL001W-BQ96VH2 84 aa5.32□□□□□ -1.56
YPT1YFL038C ATP5P09457 212 aa5.31□□□□□ -1.56
YPT1YFL038C YKR045CP36138 183 aa5.31□□□□□ -1.56
YPT1YFL038C PAM17P36147 197 aa5.31□□□□□ -1.56
YPT1YFL038C SFT2P38166 215 aa5.31□□□□□ -1.56
YPT1YFL038C YBR090CP38253 122 aa5.31□□□□□ -1.56
YPT1YFL038C YGP1P38616 354 aaKnown RBP5.31□□□□□ -1.56
YPT1YFL038C ECM14P38836 430 aa5.31□□□□□ -1.56
YPT1YFL038C CDC40P40968 455 aaPredicted RBP5.31□□□□□ -1.56
YPT1YFL038C DUG3P53871 357 aa5.31□□□□□ -1.56
YPT1YFL038C YMR166CQ03829 368 aa5.31□□□□□ -1.56
YPT1YFL038C SDH7Q04401 133 aa5.31□□□□□ -1.56
YPT1YFL038C YDL009CQ12210 107 aa5.31□□□□□ -1.56
YPT1YFL038C YCR024C-BQ3E7Z8 88 aa5.31□□□□□ -1.56
YPT1YFL038C YLR302CO13544 120 aa5.3□□□□□ -1.56
YPT1YFL038C COX2P00410 251 aa5.3□□□□□ -1.56
YPT1YFL038C MRS1P07266 363 aa5.3□□□□□ -1.56
YPT1YFL038C YER190C-BP0CX94 160 aa5.3□□□□□ -1.56
YPT1YFL038C YEL077W-AP0CX95 160 aa5.3□□□□□ -1.56
YPT1YFL038C YGR296C-BP0CX96 160 aa5.3□□□□□ -1.56
YPT1YFL038C YPL283W-BP0CX97 160 aa5.3□□□□□ -1.56
YPT1YFL038C YPR204C-AP0CX98 160 aa5.3□□□□□ -1.56
YPT1YFL038C HEM13P11353 328 aaKnown RBP5.3□□□□□ -1.56
YPT1YFL038C CUP2P15315 225 aa5.3□□□□□ -1.56
YPT1YFL038C RPA43P46669 326 aa5.3□□□□□ -1.56
YPT1YFL038C YGL260WP53056 76 aa5.3□□□□□ -1.56
YPT1YFL038C COX18P53239 316 aa5.3□□□□□ -1.56
YPT1YFL038C SUR7P54003 302 aa5.3□□□□□ -1.56
YPT1YFL038C RAV2Q03956 351 aa5.3□□□□□ -1.56
YPT1YFL038C GIM5Q04493 163 aa5.3□□□□□ -1.56
YPT1YFL038C POM33Q12164 279 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms