RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W SFT1P43682 97 aa1.58□□□□□ -2.16
SDC1YDR469W YNR062CP53748 327 aa1.58□□□□□ -2.16
SDC1YDR469W YPR114WQ06107 315 aa1.58□□□□□ -2.16
SDC1YDR469W IRC23Q08416 157 aa1.58□□□□□ -2.16
SDC1YDR469W FEX1Q08913 375 aa1.58□□□□□ -2.16
SDC1YDR469W FEX2Q08991 375 aa1.58□□□□□ -2.16
SDC1YDR469W ATP14Q12349 124 aa1.58□□□□□ -2.16
SDC1YDR469W TOP2P06786 1428 aaKnown RBP1.57□□□□□ -2.16
SDC1YDR469W KIN28P06242 306 aa1.57□□□□□ -2.16
SDC1YDR469W KRE1P17260 313 aa1.57□□□□□ -2.16
SDC1YDR469W MRP49P32388 137 aa1.57□□□□□ -2.16
SDC1YDR469W YKR070WP36151 352 aaKnown RBP1.57□□□□□ -2.16
SDC1YDR469W DOC1P53068 250 aa1.57□□□□□ -2.16
SDC1YDR469W YNR064CP53750 290 aa1.57□□□□□ -2.16
SDC1YDR469W YNL033WP53964 284 aa1.57□□□□□ -2.16
SDC1YDR469W YNL019CP53975 284 aa1.57□□□□□ -2.16
SDC1YDR469W AIM36Q03798 255 aa1.57□□□□□ -2.16
SDC1YDR469W NKP2Q06162 153 aa1.57□□□□□ -2.16
SDC1YDR469W YLR118CQ12354 227 aa1.57□□□□□ -2.16
SDC1YDR469W HSP12P22943 109 aaKnown RBP1.56□□□□□ -2.16
SDC1YDR469W SHB17P36136 271 aaKnown RBP1.56□□□□□ -2.16
SDC1YDR469W YNL217WP40152 326 aa1.56□□□□□ -2.16
SDC1YDR469W EMC4P53073 190 aa1.56□□□□□ -2.16
SDC1YDR469W SAY1P53324 424 aa1.56□□□□□ -2.16
SDC1YDR469W APS2Q00381 147 aa1.56□□□□□ -2.16
SDC1YDR469W LIP1Q03579 150 aa1.56□□□□□ -2.16
SDC1YDR469W LDB18Q07887 179 aa1.56□□□□□ -2.16
SDC1YDR469W YLR099W-AQ3E798 87 aa1.56□□□□□ -2.16
SDC1YDR469W MSB2P32334 1306 aa1.56□□□□□ -2.16
SDC1YDR469W TY1B-HO13535 1793 aa1.56□□□□□ -2.16
SDC1YDR469W MYO2P19524 1574 aaKnown RBP1.55□□□□□ -2.16
SDC1YDR469W YOR304C-AO14468 76 aa1.55□□□□□ -2.16
SDC1YDR469W GPA2P10823 449 aa1.55□□□□□ -2.16
SDC1YDR469W SCM4P32564 187 aa1.55□□□□□ -2.16
SDC1YDR469W UTP11P34247 250 aaPredicted RBP1.55□□□□□ -2.16
SDC1YDR469W YRA2P36036 203 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SDC1YDR469W RPL14AP36105 138 aaKnown RBP1.55□□□□□ -2.16
SDC1YDR469W RPL14BP38754 138 aaKnown RBP1.55□□□□□ -2.16
SDC1YDR469W GAT4P40569 121 aa1.55□□□□□ -2.16
SDC1YDR469W YJR146WP47174 117 aa1.55□□□□□ -2.16
SDC1YDR469W AIM11P87275 137 aa1.55□□□□□ -2.16
SDC1YDR469W PIR1Q03178 341 aa1.55□□□□□ -2.16
SDC1YDR469W RUB1Q03919 77 aa1.55□□□□□ -2.16
SDC1YDR469W ANT1Q06497 328 aa1.55□□□□□ -2.16
SDC1YDR469W YPR195CQ06594 109 aa1.55□□□□□ -2.16
SDC1YDR469W RRT7Q07829 113 aa1.55□□□□□ -2.16
SDC1YDR469W UIP4Q08926 304 aa1.55□□□□□ -2.16
SDC1YDR469W YOR289WQ12012 251 aaPredicted RBP1.55□□□□□ -2.16
SDC1YDR469W RAS2P01120 322 aaKnown RBP1.54□□□□□ -2.16
SDC1YDR469W DDI2P0CH63 225 aa1.54□□□□□ -2.16
SDC1YDR469W DDI3P0CH64 225 aa1.54□□□□□ -2.16
SDC1YDR469W MRS4P23500 304 aa1.54□□□□□ -2.16
SDC1YDR469W HYM1P32464 399 aa1.54□□□□□ -2.16
SDC1YDR469W AGA2P32781 87 aa1.54□□□□□ -2.16
SDC1YDR469W SFT2P38166 215 aa1.54□□□□□ -2.16
SDC1YDR469W ERV15P38312 142 aa1.54□□□□□ -2.16
SDC1YDR469W YEL073CP39974 107 aa1.54□□□□□ -2.16
SDC1YDR469W TIR3P40552 269 aa1.54□□□□□ -2.16
SDC1YDR469W BOL2P53082 120 aa1.54□□□□□ -2.16
SDC1YDR469W GEP7P53171 287 aa1.54□□□□□ -2.16
SDC1YDR469W YGR017WP53210 297 aa1.54□□□□□ -2.16
SDC1YDR469W YDR102CQ03864 110 aa1.54□□□□□ -2.16
SDC1YDR469W UPS3Q04006 179 aa1.54□□□□□ -2.16
SDC1YDR469W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SDC1YDR469W YPR013CQ12145 317 aa1.54□□□□□ -2.16
SDC1YDR469W ATG40Q99325 256 aa1.54□□□□□ -2.16
SDC1YDR469W MET5P47169 1442 aa1.54□□□□□ -2.16
SDC1YDR469W YLR236CA0A023PZG4 107 aa1.53□□□□□ -2.16
SDC1YDR469W RPL26AP05743 127 aaKnown RBP1.53□□□□□ -2.16
SDC1YDR469W DDR48P18899 430 aaKnown RBP1.53□□□□□ -2.16
SDC1YDR469W SPP41P38904 1435 aa1.53□□□□□ -2.16
SDC1YDR469W ADE6P38972 1358 aaKnown RBP1.53□□□□□ -2.16
SDC1YDR469W RGI1P40043 161 aaPredicted RBP1.53□□□□□ -2.16
SDC1YDR469W RPL26BP53221 127 aaKnown RBP1.53□□□□□ -2.16
SDC1YDR469W GRX5Q02784 150 aa1.53□□□□□ -2.16
SDC1YDR469W TMA23Q03525 211 aa1.53□□□□□ -2.16
SDC1YDR469W RAD28Q12021 506 aa1.53□□□□□ -2.16
SDC1YDR469W TSC11P40061 1430 aa1.52□□□□□ -2.17
SDC1YDR469W YER039C-AP0CD97 72 aa1.52□□□□□ -2.17
SDC1YDR469W YOL162WP0CF19 215 aa1.52□□□□□ -2.17
SDC1YDR469W YCR101CP25607 182 aa1.52□□□□□ -2.17
SDC1YDR469W MIG1P27705 504 aa1.52□□□□□ -2.17
SDC1YDR469W PEX4P29340 183 aa1.52□□□□□ -2.17
SDC1YDR469W YOR062CP36025 268 aa1.52□□□□□ -2.17
SDC1YDR469W ETR1P38071 380 aa1.52□□□□□ -2.17
SDC1YDR469W YEL067CP39978 195 aa1.52□□□□□ -2.17
SDC1YDR469W MOB1P40484 314 aa1.52□□□□□ -2.17
SDC1YDR469W PHS1P40857 217 aa1.52□□□□□ -2.17
SDC1YDR469W ALB1P47019 175 aaPredicted RBP1.52□□□□□ -2.17
SDC1YDR469W SPG1P50088 95 aa1.52□□□□□ -2.17
SDC1YDR469W ELC1Q03071 99 aa1.52□□□□□ -2.17
SDC1YDR469W CUE4Q04201 117 aaPredicted RBP1.52□□□□□ -2.17
SDC1YDR469W RNH202Q05635 350 aa1.52□□□□□ -2.17
SDC1YDR469W CSI2Q08054 341 aa1.52□□□□□ -2.17
SDC1YDR469W ATG41Q12048 136 aa1.52□□□□□ -2.17
SDC1YDR469W YOR381W-AQ3E804 55 aa1.52□□□□□ -2.17
SDC1YDR469W BUD4P47136 1447 aa1.51□□□□□ -2.17
SDC1YDR469W MDH2P22133 377 aa1.51□□□□□ -2.17
SDC1YDR469W YBL010CP32788 280 aa1.51□□□□□ -2.17
SDC1YDR469W PHO88P38264 188 aaPredicted RBP1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 164.9 ms