RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W FIP1P45976 327 aa1.29□□□□□ -2.2
SNC1YAL030W ALB1P47019 175 aaPredicted RBP1.29□□□□□ -2.2
SNC1YAL030W CCC1P47818 322 aa1.29□□□□□ -2.2
SNC1YAL030W RBL2P48606 106 aaKnown RBP1.29□□□□□ -2.2
SNC1YAL030W YDR102CQ03864 110 aa1.29□□□□□ -2.2
SNC1YAL030W YHR007C-AQ07074 71 aa1.29□□□□□ -2.2
SNC1YAL030W ATG10Q07879 167 aa1.29□□□□□ -2.2
SNC1YAL030W YGL010WP25338 174 aa1.28□□□□□ -2.2
SNC1YAL030W RPC19P28000 142 aaKnown RBP1.28□□□□□ -2.2
SNC1YAL030W YKR045CP36138 183 aa1.28□□□□□ -2.2
SNC1YAL030W HPA3P39979 161 aa1.28□□□□□ -2.2
SNC1YAL030W RIO2P40160 425 aaKnown RBP1.28□□□□□ -2.2
SNC1YAL030W RPL13BP40212 199 aaKnown RBP1.28□□□□□ -2.2
SNC1YAL030W YNR064CP53750 290 aa1.28□□□□□ -2.2
SNC1YAL030W PIR1Q03178 341 aa1.28□□□□□ -2.2
SNC1YAL030W LIP1Q03579 150 aa1.28□□□□□ -2.2
SNC1YAL030W YDR391CQ04170 232 aa1.28□□□□□ -2.2
SNC1YAL030W RIM9Q04734 239 aa1.28□□□□□ -2.2
SNC1YAL030W UPS1Q05776 175 aa1.28□□□□□ -2.2
SNC1YAL030W ATG41Q12048 136 aa1.28□□□□□ -2.2
SNC1YAL030W RPL13AQ12690 199 aaPredicted RBP1.28□□□□□ -2.2
SNC1YAL030W FLO9P39712 1322 aa1.28□□□□□ -2.2
SNC1YAL030W YOL162WP0CF19 215 aa1.27□□□□□ -2.21
SNC1YAL030W PHO13P19881 312 aa1.27□□□□□ -2.21
SNC1YAL030W UPS2P35200 230 aa1.27□□□□□ -2.21
SNC1YAL030W YBR219CP38317 127 aa1.27□□□□□ -2.21
SNC1YAL030W YAP3P38749 330 aa1.27□□□□□ -2.21
SNC1YAL030W HTD2P38790 280 aaKnown RBP1.27□□□□□ -2.21
SNC1YAL030W MPM1P40364 252 aa1.27□□□□□ -2.21
SNC1YAL030W FLX1P40464 311 aa1.27□□□□□ -2.21
SNC1YAL030W YJR015WP47090 510 aa1.27□□□□□ -2.21
SNC1YAL030W YAE1P47118 141 aaPredicted RBP1.27□□□□□ -2.21
SNC1YAL030W YML079WQ03629 201 aa1.27□□□□□ -2.21
SNC1YAL030W YHP1Q04116 353 aa1.27□□□□□ -2.21
SNC1YAL030W YPR114WQ06107 315 aa1.27□□□□□ -2.21
SNC1YAL030W PST2Q12335 198 aaKnown RBP1.27□□□□□ -2.21
SNC1YAL030W YMR030W-AQ3E760 96 aa1.27□□□□□ -2.21
SNC1YAL030W SPA2P23201 1466 aaKnown RBP1.26□□□□□ -2.21
SNC1YAL030W SPS2P08459 502 aa1.26□□□□□ -2.21
SNC1YAL030W INO4P13902 151 aa1.26□□□□□ -2.21
SNC1YAL030W STF2P16965 84 aa1.26□□□□□ -2.21
SNC1YAL030W YBL010CP32788 280 aa1.26□□□□□ -2.21
SNC1YAL030W RPB7P34087 171 aa1.26□□□□□ -2.21
SNC1YAL030W MRPL24P36525 258 aaPredicted RBP1.26□□□□□ -2.21
SNC1YAL030W YPT31P38555 223 aaKnown RBP1.26□□□□□ -2.21
SNC1YAL030W CCS1P40202 249 aaKnown RBP1.26□□□□□ -2.21
SNC1YAL030W MOB1P40484 314 aa1.26□□□□□ -2.21
SNC1YAL030W CWC27Q02770 301 aa1.26□□□□□ -2.21
SNC1YAL030W MZM1Q03429 123 aaPredicted RBP1.26□□□□□ -2.21
SNC1YAL030W CSN9Q03981 162 aa1.26□□□□□ -2.21
SNC1YAL030W UPS3Q04006 179 aa1.26□□□□□ -2.21
SNC1YAL030W YMR320WQ04897 101 aa1.26□□□□□ -2.21
SNC1YAL030W SPC2Q04969 178 aa1.26□□□□□ -2.21
SNC1YAL030W FIT2Q08906 153 aa1.26□□□□□ -2.21
SNC1YAL030W GSC2P40989 1895 aa1.25□□□□□ -2.21
SNC1YAL030W MSB2P32334 1306 aa1.25□□□□□ -2.21
SNC1YAL030W GPA2P10823 449 aa1.25□□□□□ -2.21
SNC1YAL030W POP7P38291 140 aa1.25□□□□□ -2.21
SNC1YAL030W YGR269WP40326 108 aa1.25□□□□□ -2.21
SNC1YAL030W PHB1P40961 287 aa1.25□□□□□ -2.21
SNC1YAL030W YGR201CP42936 225 aa1.25□□□□□ -2.21
SNC1YAL030W YGL193CP53097 103 aa1.25□□□□□ -2.21
SNC1YAL030W YDR366CP87287 132 aa1.25□□□□□ -2.21
SNC1YAL030W COF1Q03048 143 aaKnown RBP1.25□□□□□ -2.21
SNC1YAL030W RCE1Q03530 315 aa1.25□□□□□ -2.21
SNC1YAL030W CSI2Q08054 341 aa1.25□□□□□ -2.21
SNC1YAL030W HRD1Q08109 551 aa1.25□□□□□ -2.21
SNC1YAL030W UIP4Q08926 304 aa1.25□□□□□ -2.21
SNC1YAL030W DDR48P18899 430 aaKnown RBP1.24□□□□□ -2.21
SNC1YAL030W MRS4P23500 304 aa1.24□□□□□ -2.21
SNC1YAL030W YHL042WP38729 150 aa1.24□□□□□ -2.21
SNC1YAL030W HYR1P40581 163 aaKnown RBP1.24□□□□□ -2.21
SNC1YAL030W YJL218WP40892 196 aaKnown RBP1.24□□□□□ -2.21
SNC1YAL030W BAT2P47176 376 aaKnown RBP1.24□□□□□ -2.21
SNC1YAL030W YGR042WP53227 271 aa1.24□□□□□ -2.21
SNC1YAL030W BEM2P39960 2167 aaKnown RBP1.24□□□□□ -2.21
SNC1YAL030W RPS25BP0C0T4 108 aaKnown RBP1.23□□□□□ -2.21
SNC1YAL030W HSP12P22943 109 aaKnown RBP1.23□□□□□ -2.21
SNC1YAL030W SPT14P32363 452 aa1.23□□□□□ -2.21
SNC1YAL030W CYC2P38909 366 aa1.23□□□□□ -2.21
SNC1YAL030W GIM4P40005 111 aaKnown RBP1.23□□□□□ -2.21
SNC1YAL030W GPI2P46961 280 aa1.23□□□□□ -2.21
SNC1YAL030W YGL204CP53089 101 aa1.23□□□□□ -2.21
SNC1YAL030W YGR039WP53225 103 aa1.23□□□□□ -2.21
SNC1YAL030W HHO1P53551 258 aa1.23□□□□□ -2.21
SNC1YAL030W YMR252CQ04814 134 aa1.23□□□□□ -2.21
SNC1YAL030W RRT7Q07829 113 aa1.23□□□□□ -2.21
SNC1YAL030W YDL157CQ12082 118 aa1.23□□□□□ -2.21
SNC1YAL030W ATP14Q12349 124 aa1.23□□□□□ -2.21
SNC1YAL030W RPS25AQ3E792 108 aaPredicted RBP1.23□□□□□ -2.21
SNC1YAL030W YNL146C-AQ3E7Z1 64 aa1.23□□□□□ -2.21
SNC1YAL030W SCS22Q6Q595 175 aa1.23□□□□□ -2.21
SNC1YAL030W ADE6P38972 1358 aaKnown RBP1.22□□□□□ -2.21
SNC1YAL030W QCR8P08525 94 aa1.22□□□□□ -2.21
SNC1YAL030W FPR1P20081 114 aaKnown RBP1.22□□□□□ -2.21
SNC1YAL030W AHT1P29589 182 aa1.22□□□□□ -2.21
SNC1YAL030W SRP21P32342 167 aa1.22□□□□□ -2.21
SNC1YAL030W SHB17P36136 271 aaKnown RBP1.22□□□□□ -2.21
SNC1YAL030W ETR1P38071 380 aa1.22□□□□□ -2.21
SNC1YAL030W YEL067CP39978 195 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms