RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 MFAP3LO75121 409 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 CILPO75339 1184 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 GYPCP04921 128 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 ADH1AP07327 375 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 PAEPP09466 180 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 FGFR3P22607 806 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 INCA1Q0VD86 236 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-220ENST00000641570 LRIT3Q3SXY7 679 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 TMEM173Q86WV6 379 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-220ENST00000641570 SHC3Q92529 594 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 KAT5Q92993 513 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 LMAN2LQ9H0V9 348 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
PHGDH-220ENST00000641570 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
PHGDH-220ENST00000641570 STXBP5LQ9Y2K9 1186 aa13.79□□□□□ -0.2
PHGDH-220ENST00000641570 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 CXCL14O95715 111 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 SRGAP2BP0DMP2 458 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 CTSAP10619 480 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 VDRP11473 427 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 ACAT1P24752 427 aaKnown RBP13.78□□□□□ -0.2
PHGDH-220ENST00000641570 ANXA13P27216 316 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 NDUFV1P49821 464 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 PSMC1P62191 440 aaKnown RBP13.78□□□□□ -0.2
PHGDH-220ENST00000641570 DSG1Q02413 1049 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 INTS6LQ5JSJ4 861 aaKnown RBP13.78□□□□□ -0.2
PHGDH-220ENST00000641570 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 BCL7CQ8WUZ0 217 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-220ENST00000641570 PIK3R5Q8WYR1 880 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 KREMEN1Q96MU8 473 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 NOX5Q96PH1 765 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.78□□□□□ -0.2
PHGDH-220ENST00000641570 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
PHGDH-220ENST00000641570 ABHD10Q9NUJ1 306 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 DPP7Q9UHL4 492 aa13.78□□□□□ -0.2
PHGDH-220ENST00000641570 H3BNC9 293 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 FOXN3O00409 490 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 EPHB6O15197 1021 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 CYP26A1O43174 497 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 NOL4O94818 638 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 OAZ2O95190 189 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 SERPING1P05155 500 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 ANK1P16157 1881 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 KLRC2P26717 231 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 SNX16P57768 344 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 ORC1Q13415 861 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 FNDC1Q4ZHG4 1894 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 PPP1R2P3Q6NXS1 205 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 ZNF677Q86XU0 584 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 GLYCTKQ8IVS8 523 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 GPR65Q8IYL9 337 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 SYN2Q92777 582 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 TRIM44Q96DX7 344 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 ZBP1Q9H171 429 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 SYNCQ9H7C4 482 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 ABI2Q9NYB9 513 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-220ENST00000641570 PCDHB5Q9Y5E4 795 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 BACE2Q9Y5Z0 518 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 CDY1Q9Y6F8 540 aa13.77□□□□□ -0.21
PHGDH-220ENST00000641570 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
PHGDH-220ENST00000641570 M0QYV0 167 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 PTPN1P18031 435 aaKnown RBP13.76□□□□□ -0.21
PHGDH-220ENST00000641570 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 ADORA2BP29275 332 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 JAM2P57087 298 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 TAF12Q16514 161 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 LIN9Q5TKA1 542 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 CYP26C1Q6V0L0 522 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 TXLNBQ8N3L3 684 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-220ENST00000641570 ELOVL4Q9GZR5 314 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 SDCBP2Q9H190 292 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 FAM49BQ9NUQ9 324 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 MTRRQ9UBK8 725 aa13.76□□□□□ -0.21
PHGDH-220ENST00000641570 PRRG1O14668 218 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 GABRDO14764 452 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 AKR1B10O60218 316 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms