RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 FMO5P49326 533 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 LIG4P49917 911 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 VAMP7P51809 220 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 GRIK3Q13003 919 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 HTR4Q13639 388 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 MTF1Q14872 753 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 SLC27A1Q6PCB7 646 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 PRSS55Q6UWB4 352 aaPredicted RBP12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 TAS1R3Q7RTX0 852 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 GLYCTKQ8IVS8 523 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 ZBTB8OSQ8IWT0 167 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 REXO1L1PQ8IX06 675 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 ST13P5Q8NFI4 369 aaPredicted RBP12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 GPR152Q8TDT2 470 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 POMGNT1Q8WZA1 660 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 BAP1Q92560 729 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 CHP1Q99653 195 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 PRKD2Q9BZL6 878 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 GANQ9H2C0 597 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 TBC1D17Q9HA65 648 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 DLGAP2Q9P1A6 1054 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 CA14Q9ULX7 337 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 DAAM1Q9Y4D1 1078 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 FRYLO94915 3013 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 CACNA1AO00555 2505 aa12.78□□□□□ -0.36
ERGIC3-220ENST00000640748 LRRC53A6NM62 1247 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 PTGESO14684 152 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 HNRNPDLO14979 420 aaKnown RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 ZMYND10O75800 440 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 NOL4O94818 638 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 TRIM49P0CI25 452 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 TRIM49CP0CI26 452 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 IGFBP6P24592 240 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 PON1P27169 355 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 EFNA5P52803 228 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 MYL7Q01449 175 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 ENPEPQ07075 957 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 NCBP1Q09161 790 aaKnown RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 CETN1Q12798 172 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 NAB2Q15742 525 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 SFMBT2Q5VUG0 894 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 SLFN12LQ6IEE8 588 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 SLC39A4Q6P5W5 647 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 ELMSAN1Q6PJG2 1045 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 GET4Q7L5D6 327 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 GPD1LQ8N335 351 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 SYN2Q92777 582 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 NXPE3Q969Y0 559 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 DESI2Q9BSY9 194 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 FZD8Q9H461 694 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 KIAA1586Q9HCI6 787 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 GCNT4Q9P109 453 aa12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 R3HCC1Q9Y3T6 440 aaKnown RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 EPN1Q9Y6I3 576 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 TDRD15B5MCY1 1934 aaKnown RBP12.77□□□□□ -0.37
ERGIC3-220ENST00000640748 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 GOLGA8IPA6NC78 632 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 CASTOR2A6NHX0 329 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 GOLGA8JA6NMD2 632 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 P4HA2O15460 535 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 ADAM12O43184 909 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 KIF4AO95239 1232 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 NDUFA10O95299 355 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 EDN1P05305 212 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 SLC9A1P19634 815 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 ADSSP30520 456 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 MCCD1P59942 119 aaPredicted RBP12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 KRT83P78385 493 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 NTHL1P78549 312 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 TUSC3Q13454 348 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 SNRNP35Q16560 246 aaKnown RBP12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 KLHDC7AQ5VTJ3 777 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 PHLDB3Q6NSJ2 640 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 USP37Q86T82 979 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 HACE1Q8IYU2 909 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 HASPINQ8TF76 798 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 SAAL1Q96ER3 474 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 CLSTN3Q9BQT9 956 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 PDZD7Q9H5P4 517 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 NHEJ1Q9H9Q4 299 aaPredicted RBP12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 SLC2A4RGQ9NR83 387 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 PARP2Q9UGN5 583 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 FBXL5Q9UKA1 691 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 FBXW11Q9UKB1 542 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms