RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 ADPGKQ9BRR6 497 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 MMTAG2Q9BU76 263 aaKnown RBP12.53□□□□□ -0.4
MECP2-226ENST00000640414 DNAJC25Q9H1X3 360 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 OBP2AQ9NY56 170 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 EBF1Q9UH73 591 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 HPSEQ9Y251 543 aa12.53□□□□□ -0.4
MECP2-226ENST00000640414 TRIP11Q15643 1979 aa12.52□□□□□ -0.4
MECP2-226ENST00000640414 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 H0Y626 953 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 PODXLO00592 558 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 TRDMT1O14717 391 aaKnown RBP12.52□□□□□ -0.41
MECP2-226ENST00000640414 TRIM16O95361 564 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 VNN2O95498 520 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 APBB3O95704 486 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 MBD3O95983 291 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 UBA7P41226 1012 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
MECP2-226ENST00000640414 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 GAREM2Q75VX8 874 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 MAEAQ7L5Y9 396 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 CYP2U1Q7Z449 544 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 PIP4P1Q86T03 277 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 FMR1NBQ8N0W7 255 aaPredicted RBP12.52□□□□□ -0.41
MECP2-226ENST00000640414 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 CCSER1Q9C0I3 900 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 FBRSL1Q9HCM7 1045 aaKnown RBP12.52□□□□□ -0.41
MECP2-226ENST00000640414 ANKEF1Q9NU02 776 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 FAM13BQ9NYF5 915 aa12.52□□□□□ -0.41
MECP2-226ENST00000640414 HELZ2Q9BYK8 2649 aaKnown RBP12.52□□□□□ -0.41
MECP2-226ENST00000640414 FREM2Q5SZK8 3169 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 A0A087WWV3 80 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 A0A087X0B3 334 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 OTOL1A6NHN0 477 aaPredicted RBP12.51□□□□□ -0.41
MECP2-226ENST00000640414 EIF4E1BA6NMX2 242 aaKnown RBP12.51□□□□□ -0.41
MECP2-226ENST00000640414 CYSRT1A8MQ03 144 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
MECP2-226ENST00000640414 ZNF202O95125 648 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 LYPLA2O95372 231 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 CPB1P15086 417 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 BCKDHBP21953 392 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 SYKP43405 635 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 MAPK8P45983 427 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 RARRES1P49788 294 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 FAM160A1Q05DH4 1040 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 GPR158Q5T848 1215 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 CCDC73Q6ZRK6 1079 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 ZBTB8OSQ8IWT0 167 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 ABCA7Q8IZY2 2146 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 GLIS3Q8NEA6 775 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
MECP2-226ENST00000640414 FAM83CQ9BQN1 747 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 CRISPLD1Q9H336 500 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 HPS4Q9NQG7 708 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 CACNA2D2Q9NY47 1150 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 EVLQ9UI08 416 aaPredicted RBP12.51□□□□□ -0.41
MECP2-226ENST00000640414 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
MECP2-226ENST00000640414 THADAQ6YHU6 1953 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 LAMA5O15230 3695 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 ACKR2O00590 384 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 DHPSP49366 369 aaPredicted RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 DGKEP52429 567 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 FAM193AP78312 1265 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 LMAN2Q12907 356 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 SEMA3BQ13214 749 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PLD1Q13393 1074 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 RUNX3Q13761 415 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 DMC1Q14565 340 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 ZRSR1Q15695 479 aaKnown RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 ECM1Q16610 540 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 MAPK6Q16659 721 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 DCAF4L1Q3SXM0 396 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 TRIM61Q5EBN2 209 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PDILTQ8N807 584 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 RPLP0P6Q8NHW5 317 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PIGOQ8TEQ8 1089 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 HNRNPLLQ8WVV9 542 aaKnown RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 BSNDQ8WZ55 320 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PIGKQ92643 395 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PGLYRP2Q96PD5 576 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PNMA5Q96PV4 448 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 PLIN2Q99541 437 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 HSD17B14Q9BPX1 270 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 POLR3CQ9BUI4 534 aaPredicted RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 TPSD1Q9BZJ3 242 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 CCDC113Q9H0I3 377 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 SMG9Q9H0W8 520 aaKnown RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 THG1LQ9NWX6 298 aaKnown RBP12.5□□□□□ -0.41
MECP2-226ENST00000640414 PCNX2A6NKB5 2137 aa12.5□□□□□ -0.41
MECP2-226ENST00000640414 CACNA1EQ15878 2313 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms