RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 STX19Q8N4C7 294 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 EGFL8Q99944 293 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
COL11A1-211ENST00000635193 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-211ENST00000635193 ATP4AP20648 1035 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 RPA1P27694 616 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 NUDT2P50583 147 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 NPEPPSP55786 919 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 NCOA4Q13772 614 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 HDDC2Q7Z4H3 204 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 ZNF677Q86XU0 584 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 PPHLN1Q8NEY8 458 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 PDCD6IPQ8WUM4 868 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 USP1O94782 785 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 OTUD4Q01804 1114 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SLC34A1Q06495 639 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 FBXO25Q8TCJ0 367 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 WHRNQ9P202 907 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 FBXO40Q9UH90 709 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 CDV3Q9UKY7 258 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 C2CD2Q9Y426 696 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SESN1Q9Y6P5 492 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 TRIM49D1C9J1S8 452 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 AP3B1O00203 1094 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 RBP3P10745 1247 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SPRP35270 261 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 EFNA5P52803 228 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 GPSM2P81274 684 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 AASDHQ4L235 1098 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SLC10A5Q5PT55 438 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 THEM5Q8N1Q8 247 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 DAGLBQ8NCG7 672 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 MASTLQ96GX5 879 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 CDC42EP4Q9H3Q1 356 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 MAD2L2Q9UI95 211 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 DAPK2Q9UIK4 370 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 FLT1P17948 1338 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 BNIP3LO60238 219 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 GRB10Q13322 594 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 UGP2Q16851 508 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 TRMT5Q32P41 509 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 FAM182BQ5T319 152 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SWT1Q5T5J6 900 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 CCDC81Q6ZN84 652 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 ARMCX6Q7L4S7 300 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 FEZF2Q8TBJ5 459 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SHCBP1LQ9BZQ2 653 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 TMEM245Q9H330 911 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 RSAD1Q9HA92 442 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 MYO3AQ8NEV4 1616 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 ADGRB3O60242 1522 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 E2F8A0AVK6 867 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 DFFAO00273 331 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 DGAT1O75907 488 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 ATP6V1E1P36543 226 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SF3B3Q15393 1217 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 MROH9Q5TGP6 573 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 MTDHQ86UE4 582 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
COL11A1-211ENST00000635193 SP110Q9HB58 689 aa12.17□□□□□ -0.46
COL11A1-211ENST00000635193 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 NBNO60934 754 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 KCTD21Q4G0X4 260 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 JADE3Q92613 823 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SIK2Q9H0K1 926 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 RNPEPQ9H4A4 650 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 ZNF446Q9NWS9 450 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 NSMCE4AQ9NXX6 385 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 HOXC10Q9NYD6 342 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 AIPL1Q9NZN9 384 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 C3orf70A6NLC5 250 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 F8VZ95 297 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 ELF3P78545 371 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 TROAPQ12815 778 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 TBX2Q13207 712 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 MXD4Q14582 209 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SMTNL2Q2TAL5 461 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 ACAD10Q6JQN1 1059 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 FAM71DQ8N9W8 422 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 TRIM63Q969Q1 353 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 PAIP1Q9H074 479 aaKnown RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SEMA6BQ9H3T3 888 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 KBTBD4Q9NVX7 518 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 KPNA4O00629 521 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 HLA-DRAP01903 254 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 FAM58BPP0C7Q3 252 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 RASA1P20936 1047 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 TPI1P60174 286 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SGSM1Q2NKQ1 1148 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 Q4G0T1 1027 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 CCDC60Q8IWA6 550 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 ZBED2Q9BTP6 218 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms