RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SSH1Q8WYL5 1049 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 DDB2Q92466 427 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PMM1Q92871 262 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MAML3Q96JK9 1138 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 AIFM3Q96NN9 605 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 ACAP3Q96P50 834 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PSMD1Q99460 953 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 NEU1Q99519 415 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PDCD2LQ9BRP1 358 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 KLK15Q9H2R5 256 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 KIAA1586Q9HCI6 787 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PRDM11Q9NQV5 511 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 FOXJ2Q9P0K8 574 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA9Q9Y5G4 932 aaKnown RBP3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA8Q9Y5G5 932 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA7Q9Y5G6 932 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA6Q9Y5G7 932 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA3Q9Y5H0 932 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 PCDHGA2Q9Y5H1 932 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 NCAPD2Q15021 1401 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 KIAA1551Q9HCM1 1747 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 ACEP12821 1306 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 RGPD2P0DJD1 1756 aa3.15□□□□□ -1.91
SMARCB1-208ENST00000634926 MAP2P11137 1827 aaKnown RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 C5P01031 1676 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 NSD2O96028 1365 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 LOC102724159A0A0B4J2E5 919 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 GAGE12BA1L429 117 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 GAGE12HA6NDE8 117 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 KDM1AO60341 852 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 ZFPL1O95159 310 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 GAAP10253 952 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 LPOP22079 712 aaPredicted RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 DDX6P26196 483 aaKnown RBP eCLIP3.14□□□□□ -1.919e-7■■■■■ 33.4
SMARCB1-208ENST00000634926 RARRES1P49788 294 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 RHBDL3P58872 404 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 OCA2Q04671 838 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 ADCY1Q08828 1119 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 MRPL49Q13405 166 aaKnown RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 HDAC1Q13547 482 aaPredicted RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 PWP2Q15269 919 aaKnown RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 FSCN1Q16658 493 aaKnown RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 NBPF8Q3BBV2 869 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 ANKS6Q68DC2 871 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 SLFN12LQ6IEE8 588 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 UNQ6494/PRO21346Q6UXR6 183 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 PTF1AQ7RTS3 328 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 BMP8AQ7Z5Y6 402 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 TCP11L2Q8N4U5 519 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 CAGE1Q8TC20 777 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 DPF1Q92782 380 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 HSPBAP1Q96EW2 488 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 ZNF496Q96IT1 587 aaPredicted RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 DCLRE1CQ96SD1 692 aaKnown RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 DUSP26Q9BV47 211 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 ZNF700Q9H0M5 742 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 MS4A5Q9H3V2 200 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 MYH16Q9H6N6 1097 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 CCM2LQ9NUG4 571 aaPredicted RBP3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 OBP2AQ9NY56 170 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 KCNG1Q9UIX4 513 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 WDR17Q8IZU2 1322 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 KIF20BQ96Q89 1820 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 ZNF831Q5JPB2 1677 aa3.14□□□□□ -1.91
SMARCB1-208ENST00000634926 UBR3Q6ZT12 1888 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 VSTM5A8MXK1 200 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 TRIM38O00635 465 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 ERC2O15083 957 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 XPOTO43592 962 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 ITGAMP11215 1152 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 ENPP1P22413 925 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 AKAP5P24588 427 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 ROM1Q03395 351 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 RESTQ13127 1097 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 BIRC2Q13490 618 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 GBX1Q14549 363 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 KLHL22Q53GT1 634 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 ZNF788Q6ZQV5 615 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 EPM2AIP1Q7L775 607 aaPredicted RBP3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 GPR149Q86SP6 731 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 FAM83AQ86UY5 434 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 PHYKPLQ8IUZ5 450 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 MORC4Q8TE76 937 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 RTF1Q92541 710 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 SLC39A13Q96H72 371 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 RPS6KC1Q96S38 1066 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 CDK19Q9BWU1 502 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 WNT8AQ9H1J5 351 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 ZNF277Q9NRM2 450 aaPredicted RBP3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 IL17RBQ9NRM6 502 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 POGKQ9P215 609 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 MSRAQ9UJ68 235 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 KIF13BQ9NQT8 1826 aa3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 BRCA1P38398 1863 aaKnown RBP3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 CENPJQ9HC77 1338 aaPredicted RBP3.13□□□□□ -1.91
SMARCB1-208ENST00000634926 EDC4Q6P2E9 1401 aaKnown RBP3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 A0A0A6YYJ9 748 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 LCHNA4D1U4 455 aa3.12□□□□□ -1.91
SMARCB1-208ENST00000634926 TP73O15350 636 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms