RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 NIPA2Q8N8Q9 360 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 PRPF31Q8WWY3 499 aaKnown RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 CFAP57Q96MR6 1250 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 MPHOSPH6Q99547 160 aaKnown RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 ACO2Q99798 780 aaKnown RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 ELAC2Q9BQ52 826 aaKnown RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 TCHPQ9BT92 498 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 KCNK9Q9NPC2 374 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 KLC4Q9NSK0 619 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 DNAJC17Q9NVM6 304 aaKnown RBP8.52□□□□□ -1.04
GPC3-204ENST00000631057 NKIRAS1Q9NYS0 192 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 ZNF148Q9UQR1 794 aa8.52□□□□□ -1.04
GPC3-204ENST00000631057 TCRBV5S1A1TA0A578 114 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 POM121CA8CG34 1229 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 FAM189A1O60320 539 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 SNX3O60493 162 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 MSCO60682 206 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 SUN1O94901 812 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 TNNC2P02585 160 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 BRAFP15056 766 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 ATF7P17544 494 aaPredicted RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 EIF4BP23588 611 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 BRD2P25440 801 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 POLR2BP30876 1174 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 CDH5P33151 784 aaPredicted RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 RDXP35241 583 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 TCF7P36402 384 aaPredicted RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 MNAT1P51948 309 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 VCPP55072 806 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 MYL6P60660 151 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 RPL7AP62424 266 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 FSTL1Q12841 308 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 MORF4L2Q15014 288 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 MAPK6Q16659 721 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 ZNF699Q32M78 642 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 P3H1Q32P28 736 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 GPAT2Q6NUI2 795 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 MFSD7Q6UXD7 560 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 LBX2Q6XYB7 198 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 PPP1R21Q6ZMI0 780 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 ARHGEF18Q6ZSZ5 1173 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 TRPM8Q7Z2W7 1104 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 ERICH1Q86X53 443 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 ALLCQ8N6M5 410 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.52□□□□□ -1.05
GPC3-204ENST00000631057 MGARPQ8TDB4 240 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 CKAP2Q8WWK9 683 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 NKD2Q969F2 451 aaPredicted RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 OTUD5Q96G74 571 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 MCEEQ96PE7 176 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 RBM15Q96T37 977 aaKnown RBP eCLIP8.52□□□□□ -1.058e-21■■□□□ 12.3
GPC3-204ENST00000631057 FRMD8P1Q9BZ68 369 aaPredicted RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 MTMR12Q9C0I1 747 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 PPCSQ9HAB8 311 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 CISHQ9NSE2 258 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 GGA3Q9NZ52 723 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 DNPEPQ9ULA0 475 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 FZD1Q9UP38 647 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 SHOC2Q9UQ13 582 aa8.52□□□□□ -1.05
GPC3-204ENST00000631057 USP15Q9Y4E8 981 aaPredicted RBP8.52□□□□□ -1.05
GPC3-204ENST00000631057 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.51□□□□□ -1.05
GPC3-204ENST00000631057 hCG_1818297A0A087WSY0 165 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 TCP11X1B4DZS4 312 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 PI4K2BG5E9Z4 385 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 MED7O43513 233 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 GJB6O95452 261 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 OAS1P00973 400 aaKnown RBP8.51□□□□□ -1.05
GPC3-204ENST00000631057 ITGAVP06756 1048 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 TNFSF9P41273 254 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 ARSEP51690 589 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 GTF2A1P52655 376 aaPredicted RBP8.51□□□□□ -1.05
GPC3-204ENST00000631057 ZNF252P-AS1Q0IIN9 211 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 LAMTOR4Q0VGL1 99 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 TFDP1Q14186 410 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 SPRED3Q2MJR0 410 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 SEZ6Q53EL9 994 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 TFDP3Q5H9I0 405 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 KAZNQ674X7 775 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 MPZL3Q6UWV2 235 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 TDRPQ86YL5 185 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 GBP7Q8N8V2 638 aaPredicted RBP8.51□□□□□ -1.05
GPC3-204ENST00000631057 ANKRD42Q8N9B4 389 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 TRPM4Q8TD43 1214 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 SGSM3Q96HU1 749 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 ANKRD36BP1Q96IX9 119 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 C9orf72Q96LT7 481 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 FAM118BQ9BPY3 351 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 SPATC1LQ9H0A9 340 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 PCDH9Q9HC56 1237 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 SAYSD1Q9NPB0 183 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 UBN1Q9NPG3 1134 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 KLHL11Q9NVR0 708 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 HAUS2Q9NVX0 235 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 CTNNAL1Q9UBT7 734 aa8.51□□□□□ -1.05
GPC3-204ENST00000631057 CPSF3Q9UKF6 684 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms