RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 NME7Q9Y5B8 376 aa20.12■□□□□ 0.81
MECP2-216ENST00000627864 TRANK1O15050 2925 aa20.12■□□□□ 0.81
MECP2-216ENST00000627864 PTPRDP23468 1912 aa20.12■□□□□ 0.81
MECP2-216ENST00000627864 CPB1P15086 417 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 FOSL2P15408 326 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 PCSK1P29120 753 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 NDST1P52848 882 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 MFAP3P55082 362 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 YWHAEP62258 255 aaKnown RBP20.11■□□□□ 0.81
MECP2-216ENST00000627864 TSPY1Q01534 308 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 GCNT1Q02742 428 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 SLC8B1Q6J4K2 584 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 DPY19L2P1Q6NXN4 242 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 KREMEN1Q96MU8 473 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 ACBD6Q9BR61 282 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 CISHQ9NSE2 258 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 DNAJC12Q9UKB3 198 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 BARX2Q9UMQ3 279 aaPredicted RBP20.11■□□□□ 0.81
MECP2-216ENST00000627864 SIK3Q9Y2K2 1263 aa20.11■□□□□ 0.81
MECP2-216ENST00000627864 ATP2C2O75185 946 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 GTF2F1P35269 517 aaKnown RBP eCLIP20.1■□□□□ 0.81
MECP2-216ENST00000627864 ROR1Q01973 937 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 RAB33AQ14088 237 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 DUSP6Q16828 381 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 ARHGAP44Q17R89 818 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 KLHDC7AQ5VTJ3 777 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 TTC39CQ8N584 583 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 NEK11Q8NG66 645 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 FAM81BQ96LP2 452 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 SYT15Q9BQS2 421 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 XPO4Q9C0E2 1151 aaKnown RBP20.1■□□□□ 0.81
MECP2-216ENST00000627864 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 PLCB1Q9NQ66 1216 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 FAM207AQ9NSI2 230 aaPredicted RBP20.1■□□□□ 0.81
MECP2-216ENST00000627864 HMGXB4Q9UGU5 601 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 CDH9Q9ULB4 789 aa20.1■□□□□ 0.81
MECP2-216ENST00000627864 CBFA2T2O43439 604 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 CILPO75339 1184 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 SPATA31D3P0C874 917 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 CDR1P51861 262 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 PSMC1P62191 440 aaKnown RBP20.09■□□□□ 0.81
MECP2-216ENST00000627864 INCA1Q0VD86 236 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 ORC1Q13415 861 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 SLC39A12Q504Y0 691 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 ZNF394Q53GI3 561 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 INTS6LQ5JSJ4 861 aaKnown RBP20.09■□□□□ 0.81
MECP2-216ENST00000627864 IQCEQ6IPM2 695 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 SPATA31D4Q6ZUB0 917 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 LRRTM3Q86VH5 581 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 PPFIBP1Q86W92 1011 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 UNC93AQ86WB7 457 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 DCP1BQ8IZD4 617 aaKnown RBP20.09■□□□□ 0.81
MECP2-216ENST00000627864 UBR7Q8N806 425 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 LPIN3Q9BQK8 851 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 DPEP3Q9H4B8 488 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 AJAP1Q9UKB5 411 aaPredicted RBP20.09■□□□□ 0.81
MECP2-216ENST00000627864 PCDHB4Q9Y5E5 795 aa20.09■□□□□ 0.81
MECP2-216ENST00000627864 WDR27A2RRH5 827 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 TPM3P06753 285 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 PTPN1P18031 435 aaKnown RBP20.08■□□□□ 0.81
MECP2-216ENST00000627864 CLCN4P51793 760 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 HYAL1Q12794 435 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 GPR17Q13304 367 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 CCDC85BQ15834 202 aaPredicted RBP20.08■□□□□ 0.81
MECP2-216ENST00000627864 UVSSAQ2YD98 709 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 LLGL2Q6P1M3 1020 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 RNF19BQ6ZMZ0 732 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 ENOSF1Q7L5Y1 443 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 ACOT1Q86TX2 421 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 ZNF461Q8TAF7 563 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 WHAMMQ8TF30 809 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 SLC22A17Q8WUG5 538 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 TNIP3Q96KP6 325 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 PGLYRP2Q96PD5 576 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 TWNKQ96RR1 684 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 CDCA3Q99618 268 aaPredicted RBP20.08■□□□□ 0.81
MECP2-216ENST00000627864 NT5C1AQ9BXI3 368 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 ELOVL4Q9GZR5 314 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 GANQ9H2C0 597 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 FAM124BQ9H5Z6 455 aaPredicted RBP20.08■□□□□ 0.81
MECP2-216ENST00000627864 CRTAC1Q9NQ79 661 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 GTF3C4Q9UKN8 822 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 FHOD1Q9Y613 1164 aa20.08■□□□□ 0.81
MECP2-216ENST00000627864 A0A1W2PQC6 194 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 MYBPHLA2RUH7 354 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 AP5Z1O43299 807 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 TGM5O43548 720 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 NOL4O94818 638 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 GLUD1P00367 558 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 UCHL3P15374 230 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 EPCAMP16422 314 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 ACO1P21399 889 aaKnown RBP20.07■□□□□ 0.8
MECP2-216ENST00000627864 POLR2FP61218 127 aaKnown RBP20.07■□□□□ 0.8
MECP2-216ENST00000627864 RAPGEF1Q13905 1077 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 CCDC142Q17RM4 750 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 MDH1BQ5I0G3 518 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 TMEM270Q6UE05 265 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 PPM1EQ8WY54 764 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 JAKMIP2Q96AA8 810 aa20.07■□□□□ 0.8
MECP2-216ENST00000627864 TRIM5Q9C035 493 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms