RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 A8MXQ7 604 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 ENC1O14682 589 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 PALMO75781 387 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 B3GAT3O94766 335 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 MICAL2O94851 1124 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TIMP1P01033 207 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 ITGB1P05556 798 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 WARSP23381 471 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 NSFP46459 744 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 BRCC3P46736 316 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 SGO2Q562F6 1265 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 LLGL2Q6P1M3 1020 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 DSTYKQ6XUX3 929 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 MON1BQ7L1V2 547 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 TOP6BLQ8N6T0 577 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 URGCPQ8TCY9 931 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 RFFLQ8WZ73 363 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 SNX25Q9H3E2 840 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 CYTH4Q9UIA0 394 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 COG5Q9UP83 839 aa13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
SPTAN1-211ENST00000625980 O00370 1275 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 KIAA0355O15063 1070 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 MED7O43513 233 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 ATP1A1P05023 1023 aaKnown RBP13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 DSC1Q08554 894 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 PTP4A2Q12974 167 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 CNGA2Q16280 664 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 CNKSR3Q6P9H4 555 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 UBE2Q1Q7Z7E8 422 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 UNC93AQ86WB7 457 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 TPCN2Q8NHX9 752 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 UROC1Q96N76 676 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 NAPGQ99747 312 aaPredicted RBP13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 GOLPH3Q9H4A6 298 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 DNAJB4Q9UDY4 337 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 STXBP5LQ9Y2K9 1186 aa13.69□□□□□ -0.22
SPTAN1-211ENST00000625980 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CTAGE9A4FU28 777 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 URI1O94763 535 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 KIF4AO95239 1232 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 LSM8O95777 96 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CYP1A2P05177 515 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CSF2RAP15509 400 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 ACAT1P24752 427 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CDH5P33151 784 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CCDC142Q17RM4 750 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 PPP1R26Q5T8A7 1209 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 DCLRE1AQ6PJP8 1040 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 MMS22LQ6ZRQ5 1243 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 PHF13Q86YI8 300 aaPredicted RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 TMEM35BQ8NCS4 154 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 UBA3Q8TBC4 463 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CTTNBP2NLQ9P2B4 639 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 CNOT8Q9UFF9 292 aaKnown RBP13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 GTF3C4Q9UKN8 822 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 PCDHGC5Q9Y5F6 944 aa13.68□□□□□ -0.22
SPTAN1-211ENST00000625980 M0QYV0 167 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 GABRDO14764 452 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 NCK2O43639 380 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 ATP2C2O75185 946 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 UPP2O95045 317 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 FTCDO95954 541 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 RAG1P15918 1043 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 CAPN2P17655 700 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 RRM1P23921 792 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 RFC2P35250 354 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 OR1G1P47890 313 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 CDR1P51861 262 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 IKBKEQ14164 716 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 PTPROQ16827 1216 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 GOLGA7BQ2TAP0 167 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 KIAA0319Q5VV43 1072 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 LCLAT1Q6UWP7 414 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 NPAS4Q8IUM7 802 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 CRYBG2Q8N1P7 616 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 LHX5Q9H2C1 402 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 ADAM22Q9P0K1 906 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 TJP2Q9UDY2 1190 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 KIAA1257Q9ULG3 409 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 TTC3P53804 2025 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 TBKBP1A7MCY6 615 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 PFKMP08237 780 aa13.67□□□□□ -0.22
SPTAN1-211ENST00000625980 FAM163BP0C2L3 166 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms