RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 PPP1R15BQ5SWA1 713 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 CCDC70Q6NSX1 233 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 C1orf131Q8NDD1 294 aaKnown RBP12.45□□□□□ -0.42
CCDC163-201ENST00000625766 ALG3Q92685 438 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 RHOXF2Q9BQY4 288 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 HMGXB4Q9UGU5 601 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 ANAPC7Q9UJX3 599 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 PTCH2Q9Y6C5 1203 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 THSD7BQ9C0I4 1608 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 RALGAPA2Q2PPJ7 1873 aa12.45□□□□□ -0.42
CCDC163-201ENST00000625766 A0A0U1RQG5 324 aaPredicted RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 A0A1W2PQ45 241 aaPredicted RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 A0A1W2PQY0 241 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 FAM170AA1A519 330 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 ARVCFO00192 962 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 CAPN15O75808 1086 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 SKIP12755 728 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 SSTR3P32745 418 aaPredicted RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 CDK7P50613 346 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 DNA2P51530 1060 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 CLCN6P51797 869 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 LILRA4P59901 499 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 C2orf54Q08AI8 447 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 PAK2Q13177 524 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 ZNF268Q14587 947 aaPredicted RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 ZNF618Q5T7W0 954 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 DCAF12L1Q5VU92 463 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 PNKPQ96T60 521 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 NAP1L3Q99457 506 aaPredicted RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 MRPL45Q9BRJ2 306 aaKnown RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 UBN1Q9NPG3 1134 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 RBM12Q9NTZ6 932 aaKnown RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 SMARCAL1Q9NZC9 954 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 WDR35Q9P2L0 1181 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 CCDC188H7C350 402 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 SPTLC1O15269 473 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 MICAL2O94851 1124 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 THP07101 528 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 CKBP12277 381 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 MAN1A1P33908 653 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 SV2CQ496J9 727 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 C2CD6Q53TS8 623 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 AGMOQ6ZNB7 445 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 TOP6BLQ8N6T0 577 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 C3orf20Q8ND61 904 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 C18orf8Q96DM3 657 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 LRRC1Q9BTT6 524 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
CCDC163-201ENST00000625766 STARD7Q9NQZ5 370 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 CYTH4Q9UIA0 394 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
CCDC163-201ENST00000625766 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 ATP8B1O43520 1251 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 SPOPO43791 374 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 GHRP10912 638 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 RPL9P32969 192 aaKnown RBP12.43□□□□□ -0.42
CCDC163-201ENST00000625766 SCN1AP35498 2009 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 GNL1P36915 607 aaPredicted RBP12.43□□□□□ -0.42
CCDC163-201ENST00000625766 PPP2R5EQ16537 467 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 PTPROQ16827 1216 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 PKDCCQ504Y2 493 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 ARHGAP17Q68EM7 881 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 KRT35Q92764 455 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 PGBD4Q96DM1 585 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 DNAI2Q9GZS0 605 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC163-201ENST00000625766 TRPV6Q9H1D0 765 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 MIOSQ9NXC5 875 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 IP6K2Q9UHH9 426 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 HTTP42858 3142 aa12.43□□□□□ -0.42
CCDC163-201ENST00000625766 ARL5CA6NH57 179 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 MEIS3P2A8K0S8 358 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 TMEM110-MUSTN1A8MSY1 372 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 INPPL1O15357 1258 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 MGEA5O60502 916 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 PAX3P23760 479 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 RWDD2BP57060 319 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 RNASE9P60153 205 aaKnown RBP12.42□□□□□ -0.42
CCDC163-201ENST00000625766 PTPN20Q4JDL3 420 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 LLGL2Q6P1M3 1020 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.42□□□□□ -0.42
CCDC163-201ENST00000625766 STK32AQ8WU08 396 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
CCDC163-201ENST00000625766 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 GAD1Q99259 594 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 TRIM7Q9C029 511 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 MIS12Q9H081 205 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 PTPN22Q9Y2R2 807 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 NME7Q9Y5B8 376 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 HUS1O60921 280 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 ZRANB2O95218 330 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC163-201ENST00000625766 FGGP02679 453 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 SETSIPP0DME0 302 aa12.42□□□□□ -0.42
CCDC163-201ENST00000625766 HSPA6P17066 643 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms