RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 OPA1O60313 960 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 ZMYND10O75800 440 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 RECQL4O94761 1208 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 PYGMP11217 842 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 PAX3P23760 479 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 GABRB2P47870 512 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 TMEM62Q0P6H9 643 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 ARHGEF6Q15052 776 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 PTPROQ16827 1216 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 SV2CQ496J9 727 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 ZNF394Q53GI3 561 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 ODF2Q5BJF6 829 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 SND1Q7KZF4 910 aaKnown RBP eCLIP17.31■□□□□ 0.36
LDB3-208ENST00000623007 POLNQ7Z5Q5 900 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 HPCAL4Q9UM19 191 aa17.31■□□□□ 0.36
LDB3-208ENST00000623007 SCN10AQ9Y5Y9 1956 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 TCRBV5S1A1TA0A578 114 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 NDC80O14777 642 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 GPR182O15218 404 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 HSF2BPO75031 334 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 SP3Q02447 781 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 LMNB2Q03252 620 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 LCLAT1Q6UWP7 414 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
LDB3-208ENST00000623007 ZDHHC17Q8IUH5 632 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 TFAP2BQ92481 460 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 TRIB2Q92519 343 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 MAGOHBQ96A72 148 aaKnown RBP17.3■□□□□ 0.36
LDB3-208ENST00000623007 HEXIM2Q96MH2 286 aaKnown RBP17.3■□□□□ 0.36
LDB3-208ENST00000623007 TSPYL1Q9H0U9 437 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 SMYD3Q9H7B4 428 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 GDAP2Q9NXN4 497 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 AMACRQ9UHK6 382 aa17.3■□□□□ 0.36
LDB3-208ENST00000623007 GOLGA6BA6NDN3 693 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 CAND2O75155 1236 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 PTPN7P35236 360 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 ZNF211Q13398 564 aaPredicted RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 HLTFQ14527 1009 aaKnown RBP eCLIP17.29■□□□□ 0.36
LDB3-208ENST00000623007 HADHQ16836 314 aaKnown RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 FBXO47Q5MNV8 452 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 PPP1R15BQ5SWA1 713 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 STK32AQ8WU08 396 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 IFT81Q8WYA0 676 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 BTBD6Q96KE9 485 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 ERP44Q9BS26 406 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 EIF2AQ9BY44 585 aaKnown RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 EFR3BQ9Y2G0 817 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 PDCD11Q14690 1871 aaKnown RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 O00370 1275 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 PIRO00625 290 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 ECM2O94769 699 aaPredicted RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 KRT7P08729 469 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 KRT3P12035 628 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 ITGA4P13612 1032 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 FGFR4P22455 802 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 RAB27AP51159 221 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 C9orf57Q5W0N0 161 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 SERINC5Q86VE9 423 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 TRPV1Q8NER1 839 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 LENG1Q96BZ8 264 aaPredicted RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 FRMD8P1Q9BZ68 369 aaPredicted RBP17.29■□□□□ 0.36
LDB3-208ENST00000623007 CDHR5Q9HBB8 845 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 XPNPEP3Q9NQH7 507 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 HESX1Q9UBX0 185 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 NFU1Q9UMS0 254 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 SQORQ9Y6N5 450 aa17.29■□□□□ 0.36
LDB3-208ENST00000623007 RPS6KA5O75582 802 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 TOMM70O94826 608 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 GAS8O95995 478 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 MYBL2P10244 700 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 SKIP12755 728 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 OAS2P29728 719 aaKnown RBP17.28■□□□□ 0.36
LDB3-208ENST00000623007 CARSP49589 748 aaKnown RBP17.28■□□□□ 0.36
LDB3-208ENST00000623007 TAF6P49848 677 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 NDST1P52848 882 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 CDH8P55286 799 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 CFAP58Q5T655 872 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 ARHGAP17Q68EM7 881 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 TWF2Q6IBS0 349 aaKnown RBP17.28■□□□□ 0.36
LDB3-208ENST00000623007 WDTC1Q8N5D0 677 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 PRELID2Q8N945 189 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 CCHCR1Q8TD31 782 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 ELOVL4Q9GZR5 314 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 SNX9Q9Y5X1 595 aa17.28■□□□□ 0.36
LDB3-208ENST00000623007 SMIM28A0A1B0GU29 152 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 M0QYV0 167 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 ADAMTS4O75173 837 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 MICAL2O94851 1124 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 TJP3O95049 919 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 CALCAP01258 141 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 CFHP08603 1231 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 CTGFP29279 349 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 LRPAP1P30533 357 aa17.27■□□□□ 0.36
LDB3-208ENST00000623007 COILP38432 576 aaPredicted RBP17.27■□□□□ 0.36
LDB3-208ENST00000623007 HSPA9P38646 679 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms