RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 UROC1Q96N76 676 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 ACO2Q99798 780 aaKnown RBP9.57□□□□□ -0.88
HDAC9-229ENST00000622668 NUP85Q9BW27 656 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 ELOVL4Q9GZR5 314 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 BLOC1S4Q9NUP1 217 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 FHOD1Q9Y613 1164 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 CCL16O15467 120 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 VDRP11473 427 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 TNFSF9P41273 254 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 FUT10Q6P4F1 479 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 GJB7Q6PEY0 223 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 TPGS1Q6ZTW0 290 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 TMEM161BQ8NDZ6 487 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 TIFAQ96CG3 184 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 TGS1Q96RS0 853 aaKnown RBP9.57□□□□□ -0.88
HDAC9-229ENST00000622668 ADAM28Q9UKQ2 775 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 ITIH6Q6UXX5 1313 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 PER2O15055 1255 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 TSPAN3O60637 253 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 CA4P22748 312 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 EPHB2P29323 1055 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 SERPINB6P35237 376 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 RABGGTBP53611 331 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 ATAD1Q8NBU5 361 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 ZNF564Q8TBZ8 553 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-229ENST00000622668 GPR152Q8TDT2 470 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 AUTS2Q8WXX7 1259 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 MCRS1Q96EZ8 462 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 MRFAP1L1Q96HT8 127 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 EIF2AQ9BY44 585 aaKnown RBP9.57□□□□□ -0.88
HDAC9-229ENST00000622668 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.57□□□□□ -0.88
HDAC9-229ENST00000622668 COL18A1P39060 1754 aa9.57□□□□□ -0.88
HDAC9-229ENST00000622668 RPL9P32969 192 aaKnown RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 AP1B1Q10567 949 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 NT5DC4Q86YG4 428 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 UBLCP1Q8WVY7 318 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 ING5Q8WYH8 240 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 XPO6Q96QU8 1125 aaKnown RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 RAD9AQ99638 391 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 STK33Q9BYT3 514 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 WDCPQ9H6R7 721 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 PARVAQ9NVD7 372 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 MAFBQ9Y5Q3 323 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 NUP98P52948 1817 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 KRT7P08729 469 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 PNMA6AP0CW24 399 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 CSH1P0DML2 217 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 CSH2P0DML3 217 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SLC2A3P11169 496 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 C2CD6Q53TS8 623 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 ACRBPQ8NEB7 543 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 TMC2Q8TDI7 906 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 USP33Q8TEY7 942 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SMARCD1Q96GM5 515 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 TMEM176AQ96HP8 235 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 KRT12Q99456 494 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 AGPAT1Q99943 283 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 TSPYL1Q9H0U9 437 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 CYP3A43Q9HB55 503 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 IL23AQ9NPF7 189 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 VPS28Q9UK41 221 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SMIM28A0A1B0GU29 152 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 ASS1P00966 412 aaKnown RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 OR4Q2P0C623 313 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SLC12A3P55017 1021 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 TMEM119Q4V9L6 283 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 CEP68Q76N32 757 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 TMEM86AQ8N2M4 240 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 C18orf25Q96B23 403 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 PPP1R13BQ96KQ4 1090 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 MCEEQ96PE7 176 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 MMTAG2Q9BU76 263 aaKnown RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 VAV3Q9UKW4 847 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 KIAA1257Q9ULG3 409 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 BARX2Q9UMQ3 279 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 HYOU1Q9Y4L1 999 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 ITGB4P16144 1822 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 TTC26A0AVF1 554 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 F8VP50 259 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 C22orf31O95567 290 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 MAPTP10636 758 aaKnown RBP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 ETFBP38117 255 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 YWHAGP61981 247 aaKnown RBP eCLIP9.56□□□□□ -0.88
HDAC9-229ENST00000622668 MORN1Q5T089 497 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 EFHBQ8N7U6 833 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 P3H4Q92791 437 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SLC9A7Q96T83 725 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 FLRT1Q9NZU1 646 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SLC25A13Q9UJS0 675 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 SAR1BQ9Y6B6 198 aa9.56□□□□□ -0.88
HDAC9-229ENST00000622668 IGLV3-22A0A075B6J6 115 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 GRM5P41594 1212 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 NRIP1P48552 1158 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 RWDD2BP57060 319 aa9.55□□□□□ -0.88
HDAC9-229ENST00000622668 GFPT1Q06210 699 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms