RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 ACTN3Q08043 901 aaPredicted RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 PTP4A2Q12974 167 aa18.51■□□□□ 0.55
FAM3A-222ENST00000621967 ITGA7Q13683 1181 aa18.51■□□□□ 0.55
FAM3A-222ENST00000621967 SGO2Q562F6 1265 aa18.51■□□□□ 0.55
FAM3A-222ENST00000621967 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
FAM3A-222ENST00000621967 SYDE1Q6ZW31 735 aaPredicted RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 TRMT10CQ7L0Y3 403 aaKnown RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 SUGP1Q8IWZ8 645 aaKnown RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 CHMP6Q96FZ7 201 aa18.51■□□□□ 0.55
FAM3A-222ENST00000621967 ZNF317Q96PQ6 595 aaPredicted RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 POLR3FQ9H1D9 316 aaPredicted RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 DHX33Q9H6R0 707 aaKnown RBP18.51■□□□□ 0.55
FAM3A-222ENST00000621967 MAGEB2O15479 319 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 MAFO75444 373 aaPredicted RBP18.5■□□□□ 0.55
FAM3A-222ENST00000621967 CALCAP01258 141 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 CHN1P15882 459 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 MAN1A1P33908 653 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 BPIFB4P59827 614 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 PPARDQ03181 441 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 KRT17Q04695 432 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 CALCOCO2Q13137 446 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 PPP1R7Q15435 360 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 CACNA2D3Q8IZS8 1091 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 ANKLE1Q8NAG6 615 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 BICD1Q96G01 975 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 CEP89Q96ST8 783 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 ROPN1BQ9BZX4 212 aaPredicted RBP18.5■□□□□ 0.55
FAM3A-222ENST00000621967 TRIM7Q9C029 511 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 STMN4Q9H169 189 aaPredicted RBP18.5■□□□□ 0.55
FAM3A-222ENST00000621967 CCDC134Q9H6E4 229 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 ROPN1Q9HAT0 212 aaPredicted RBP18.5■□□□□ 0.55
FAM3A-222ENST00000621967 AAASQ9NRG9 546 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 KCNG1Q9UIX4 513 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 DNAH12Q6ZR08 3092 aa18.5■□□□□ 0.55
FAM3A-222ENST00000621967 TLDC2A0PJX2 215 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 C22orf31O95567 290 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 C4BPAP04003 597 aaKnown RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 RRM1P23921 792 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 IVDP26440 423 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 IFI35P80217 286 aaPredicted RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 AUHQ13825 339 aaKnown RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 PTK6Q13882 451 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 RNF187Q5TA31 235 aaPredicted RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 GKAP1Q5VSY0 366 aaPredicted RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 FBXW10Q5XX13 1052 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 MON1BQ7L1V2 547 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 EPS8L3Q8TE67 593 aaKnown RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 C1orf54Q8WWF1 131 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 DDX27Q96GQ7 796 aaKnown RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 FAM84AQ96KN4 292 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 GTF2IRD1Q9UHL9 959 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 GAS2O43903 313 aaKnown RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 PIGRP01833 764 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 HLA-DRAP01903 254 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 ITIH2P19823 946 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 ACO1P21399 889 aaKnown RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 LIG4P49917 911 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 MTHFD1LQ6UB35 978 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 LRRC71Q8N4P6 559 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 CABS1Q96KC9 395 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 HERPUD2Q9BSE4 406 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 ACTR5Q9H9F9 607 aaPredicted RBP18.49■□□□□ 0.55
FAM3A-222ENST00000621967 CHST7Q9NS84 486 aa18.49■□□□□ 0.55
FAM3A-222ENST00000621967 UMODL1Q5DID0 1318 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 RASGRF2O14827 1237 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 WNT7BP56706 349 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 WDR44Q5JSH3 913 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 MARCH8Q5T0T0 291 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 TDRD10Q5VZ19 366 aaKnown RBP18.48■□□□□ 0.55
FAM3A-222ENST00000621967 EFCAB12Q6NXP0 572 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 CCDC121Q6ZUS5 278 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 SESTD1Q86VW0 696 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 TMEM143Q96AN5 459 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 ZBTB10Q96DT7 871 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 OSBPL7Q9BZF2 842 aa18.48■□□□□ 0.55
FAM3A-222ENST00000621967 SENP6Q9GZR1 1112 aaPredicted RBP18.48■□□□□ 0.55
FAM3A-222ENST00000621967 CDC42EP4Q9H3Q1 356 aaKnown RBP18.48■□□□□ 0.55
FAM3A-222ENST00000621967 PROSCO94903 275 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 VNN1O95497 513 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 CRELD2Q6UXH1 353 aaPredicted RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 TRIM72Q6ZMU5 477 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 CPLX4Q7Z7G2 160 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 GRK7Q8WTQ7 553 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 TCP11Q8WWU5 503 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 CPA5Q8WXQ8 436 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 P3H4Q92791 437 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 SNF8Q96H20 258 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 SELENOSQ9BQE4 189 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 DCLK3Q9C098 648 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 PTPRJQ12913 1337 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 IGKV6-21A0A0C4DH24 114 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 SMIM23A6NLE4 172 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 HOXC8P31273 242 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 HNRNPH1P31943 449 aaKnown RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 NSFP46459 744 aaKnown RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 CLCN3P51790 818 aa18.47■□□□□ 0.55
FAM3A-222ENST00000621967 NLRP11P59045 1033 aaKnown RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 PTPN11Q06124 597 aaPredicted RBP18.47■□□□□ 0.55
FAM3A-222ENST00000621967 KLF1Q13351 362 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms