RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SLC39A12Q504Y0 691 aa19.87■□□□□ 0.77
CIRBP-245ENST00000621399 DCP1BQ8IZD4 617 aaKnown RBP19.87■□□□□ 0.77
CIRBP-245ENST00000621399 C12orf76Q8N812 135 aaPredicted RBP19.87■□□□□ 0.77
CIRBP-245ENST00000621399 MSLNLQ96KJ4 702 aa19.87■□□□□ 0.77
CIRBP-245ENST00000621399 PGLYRP2Q96PD5 576 aa19.87■□□□□ 0.77
CIRBP-245ENST00000621399 APOL5Q9BWW9 433 aa19.87■□□□□ 0.77
CIRBP-245ENST00000621399 AFF4Q9UHB7 1163 aaKnown RBP19.87■□□□□ 0.77
CIRBP-245ENST00000621399 CD207Q9UJ71 328 aa19.87■□□□□ 0.77
CIRBP-245ENST00000621399 UNC80Q8N2C7 3258 aa19.87■□□□□ 0.77
CIRBP-245ENST00000621399 A8MXQ7 604 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 HCRTO43612 131 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 ADCY1Q08828 1119 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 LRMPQ12912 555 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 VWA3BQ502W6 1294 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 SYCE2Q6PIF2 218 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 EHBP1Q8NDI1 1231 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 TATDN2Q93075 761 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 SDCBP2Q9H190 292 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 SFXN1Q9H9B4 322 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 CYP3A43Q9HB55 503 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 CYP4F11Q9HBI6 524 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 CDH9Q9ULB4 789 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 MAFFQ9ULX9 164 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 PRUNE2Q8WUY3 3088 aa19.86■□□□□ 0.77
CIRBP-245ENST00000621399 BECN2A8MW95 431 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 PES1O00541 588 aaKnown RBP19.85■□□□□ 0.77
CIRBP-245ENST00000621399 PRRG1O14668 218 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 ZMYND10O75800 440 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 C8AP07357 584 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 CDK11BP21127 795 aaKnown RBP19.85■□□□□ 0.77
CIRBP-245ENST00000621399 CDR1P51861 262 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 SMARCB1Q12824 385 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 AAK1Q2M2I8 961 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 LEXMQ3ZCV2 418 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 INTS6LQ5JSJ4 861 aaKnown RBP19.85■□□□□ 0.77
CIRBP-245ENST00000621399 PPM1LQ5SGD2 360 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 RARS2Q5T160 578 aaKnown RBP19.85■□□□□ 0.77
CIRBP-245ENST00000621399 CCDC149Q6ZUS6 474 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 LRRTM3Q86VH5 581 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 DHX40Q8IX18 779 aaKnown RBP19.85■□□□□ 0.77
CIRBP-245ENST00000621399 ANKRD20A12PQ8NF67 263 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 SLC7A14Q8TBB6 771 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 FAXDC2Q96IV6 333 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 SYT15Q9BQS2 421 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 BCO2Q9BYV7 579 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 NDST4Q9H3R1 872 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 TAB2Q9NYJ8 693 aa19.85■□□□□ 0.77
CIRBP-245ENST00000621399 CCDC195A0A1B0GUA6 201 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 RFPL2O75678 378 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 SEC24AO95486 1093 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 CAVIN2O95810 425 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 TPM2P07951 284 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 CD58P19256 250 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 PSMC1P62191 440 aaKnown RBP19.84■□□□□ 0.77
CIRBP-245ENST00000621399 UVSSAQ2YD98 709 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 MIIPQ5JXC2 388 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 CES5AQ6NT32 575 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 TMC5Q6UXY8 1006 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 GBP6Q6ZN66 633 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 TCEAL8Q8IYN2 117 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 ATAD1Q8NBU5 361 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 LMO3Q8TAP4 145 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 NT5C1BQ96P26 610 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 CRACR2AQ9BSW2 395 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 INTS2Q9H0H0 1204 aaKnown RBP19.84■□□□□ 0.77
CIRBP-245ENST00000621399 S1PR5Q9H228 398 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 GCNT4Q9P109 453 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 GTF3C4Q9UKN8 822 aa19.84■□□□□ 0.77
CIRBP-245ENST00000621399 MYBPHLA2RUH7 354 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 MTMR11A4FU01 709 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 ATP2C2O75185 946 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 ITIH3Q06033 890 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 DUSP4Q13115 394 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 CUL2Q13617 745 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 KRT31Q15323 416 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 NFE2Q16621 373 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-245ENST00000621399 RTL10Q7L3V2 364 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 SMRP1Q8NCR6 262 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 C2orf15Q8WU43 125 aaKnown RBP19.83■□□□□ 0.77
CIRBP-245ENST00000621399 ATXN2LQ8WWM7 1075 aaKnown RBP19.83■□□□□ 0.77
CIRBP-245ENST00000621399 VPS16Q9H269 839 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 ADAM7Q9H2U9 754 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 CBX8Q9HC52 389 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 TMLHEQ9NVH6 421 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 ZDHHC7Q9NXF8 308 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 SLC27A5Q9Y2P5 690 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 NME7Q9Y5B8 376 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 PCDHB5Q9Y5E4 795 aa19.83■□□□□ 0.77
CIRBP-245ENST00000621399 XIRP2A4UGR9 3374 aa19.83■□□□□ 0.76
CIRBP-245ENST00000621399 TSC2P49815 1807 aa19.83■□□□□ 0.76
CIRBP-245ENST00000621399 GTPBP10A4D1E9 387 aaKnown RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 VNN2O95498 520 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 HNRNPA1P09651 372 aaKnown RBP eCLIP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 ZNF18P17022 549 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 PTPN1P18031 435 aaKnown RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 NDST1P52848 882 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 MRPS5P82675 430 aaKnown RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 IQCB1Q15051 598 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 MAPRE1Q15691 268 aaKnown RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 PUS10Q3MIT2 529 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms