RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 NUMBP49757 651 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DEFA1P59665 94 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DEFA3P59666 94 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C4orf50Q6ZRC1 276 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF571Q7Z3V5 609 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 RBM46Q8TBY0 533 aaKnown RBP5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ELOVL6Q9H5J4 265 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 TUBE1Q9UJT0 475 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 SYNMO15061 1565 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 GRIN2DO15399 1336 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ASMTLO95671 621 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ABCG1P45844 678 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 DGCR6Q14129 220 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 MCF2L2Q86YR7 1114 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ATP8B4Q8TF62 1192 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 C8orf37Q96NL8 207 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 HDHD2Q9H0R4 259 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 ARHGAP20Q9P2F6 1191 aa5.26□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A9O60656 530 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CHEK2O96017 543 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 MYBP10242 640 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A6P19224 532 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A1P22309 533 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A4P22310 534 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A3P35503 534 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A5P35504 534 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 FAM214AQ32MH5 1076 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 C16orf62Q7Z3J2 963 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 OSBPL6Q9BZF3 934 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 DHX36Q9H2U1 1008 aaKnown RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A7Q9HAW7 530 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A10Q9HAW8 530 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UGT1A8Q9HAW9 530 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 FBXO6Q9NRD1 293 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 RABGEF1Q9UJ41 708 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SPATA2Q9UM82 520 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SYNGAP1Q96PV0 1343 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 H3BSA7 217 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 RIPK2O43353 540 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CCNT2O60583 730 aaKnown RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 BAIAP3O94812 1187 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CYFIP1Q7L576 1253 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 BLOC1S6Q9UL45 172 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SNX8Q9Y5X2 465 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PRR23D1E9PI22 279 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CNOT3O75175 753 aaKnown RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CDH16O75309 829 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PRR23D2P0DMB1 279 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 STAT4Q14765 748 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PALB2Q86YC2 1186 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 MED10Q9BTT4 135 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF212Q9UDV6 495 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SLC12A4Q9UP95 1085 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 MRPL42Q9Y6G3 142 aaKnown RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 POLR1AO95602 1720 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PRLP01236 227 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 RGS2P41220 211 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 XRCC4Q13426 336 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ARMC4Q5T2S8 1044 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PCNX4Q63HM2 1172 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CROCCP3Q8IVE0 287 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CNKSR1Q969H4 720 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 FAM136AQ96C01 138 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 WNT8AQ9H1J5 351 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 EHD1Q9H4M9 534 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 GGA2Q9UJY4 613 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 GRAP2O75791 330 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 STT3AP46977 705 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ATN1P54259 1190 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 AQP4P55087 323 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 MB21D2Q8IYB1 491 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 RIBC2Q9H4K1 309 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 GREM2Q9H772 168 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PRPSAP2O60256 369 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 TBC1D4O60343 1298 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 NUP107P57740 925 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 FSTL1Q12841 308 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PKN2Q16513 984 aaKnown RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CYP4A22Q5TCH4 519 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 UNC13DQ70J99 1090 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SLC10A4Q96EP9 437 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 NT5C1BQ96P26 610 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SEPHS2Q99611 448 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PI4K2AQ9BTU6 479 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 JMJD4Q9H9V9 463 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 PARVBQ9HBI1 364 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 HLA-DOAP06340 250 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 NAT1P18440 290 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CAV1Q03135 178 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ECHDC2Q86YB7 292 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 LZTS2Q9BRK4 669 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 NDUFA13Q9P0J0 144 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 SMG5Q9UPR3 1016 aaKnown RBP5.25□□□□□ -1.57
VPS13D-214ENST00000620676 CFAP74Q9C0B2 1584 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 GSC2O15499 205 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ATP6V1B2P21281 511 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ZSWIM7Q19AV6 140 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 ZNF790Q6PG37 636 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 C3orf67Q6ZVT6 689 aa5.25□□□□□ -1.57
VPS13D-214ENST00000620676 FAR1Q8WVX9 515 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms