RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 RGS2P41220 211 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 PSMD7P51665 324 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 HPCAP84074 193 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CAV1Q03135 178 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 BFSP1Q12934 665 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 DCTN2Q13561 401 aaKnown RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CCDC92Q53HC0 331 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 SFT2D3Q587I9 215 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 CENPUQ71F23 418 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 RHPN2Q8IUC4 686 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 ARHGEF19Q8IW93 802 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 FHDC1Q9C0D6 1143 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZNF395Q9H8N7 513 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 ATF5Q9Y2D1 282 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 PCDHA3Q9Y5H8 950 aa10.27□□□□□ -0.77
TNFAIP3-210ENST00000620204 TISP43B9A030 160 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 DDX39AO00148 427 aaKnown RBP10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZNF862O60290 1169 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 INHBAP08476 426 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 FAM163BP0C2L3 166 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 PMLP29590 882 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 SCNN1DP51172 638 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 UBXN2AP68543 259 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 KIF22Q14807 665 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZNF554Q86TJ5 538 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 PANX3Q96QZ0 392 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 PCDHB18PQ96TA0 734 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 DCLK3Q9C098 648 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 DBNDD1Q9H9R9 158 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 SLC7A8Q9UHI5 535 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZMYM2Q9UBW7 1377 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 CFLARO15519 480 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 TOM1L1O75674 476 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 AQP5P55064 265 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 MARSP56192 900 aaKnown RBP10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 DLG4P78352 724 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 DPP8Q6V1X1 898 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 TEKT1Q969V4 418 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 DCUN1D5Q9BTE7 237 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 MECRQ9BV79 373 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 APOL6Q9BWW8 343 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 LRRC19Q9H756 370 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 SH3GLB1Q9Y371 365 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 HEMK1Q9Y5R4 338 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 NRAPQ86VF7 1730 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 UBR2Q8IWV8 1755 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 A8MXQ7 604 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZBTB7AO95365 584 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 VIL1P09327 827 aaKnown RBP10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 TAF1P21675 1872 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 MAN1A1P33908 653 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 MLH1P40692 756 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 SERPINB8P50452 374 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 TRMT5Q32P41 509 aaKnown RBP10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 C11orf63Q6NUN7 778 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 C7orf43Q8WVR3 580 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 PCDHA1Q9Y5I3 950 aa10.26□□□□□ -0.77
TNFAIP3-210ENST00000620204 ASTN1O14525 1302 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 C15orf38-AP3S2A0A0A6YYH1 394 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 TRIM43BA6NCK2 446 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZMPSTE24O75844 475 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 CA8P35219 290 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 MSX2P35548 267 aaPredicted RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 UBAP2LQ14157 1087 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 TMEM259Q4ZIN3 620 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 MFSD14BQ5SR56 506 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 ARPINQ7Z6K5 226 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 RSPH3Q86UC2 560 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 TRIM50Q86XT4 487 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 OGFOD1Q8N543 542 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 GLIS1Q8NBF1 620 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 DHX38Q92620 1227 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 RPL26L1Q9UNX3 145 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 ECM29Q5VYK3 1845 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 NDC80O14777 642 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 PPEF1O14829 653 aaPredicted RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 XPOTO43592 962 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 RAG1P15918 1043 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 PHBP35232 272 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 CHN2P52757 468 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 BASP1P80723 227 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 FOLH1Q04609 750 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 PEX6Q13608 980 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 ATP13A4Q4VNC1 1196 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 CMPK2Q5EBM0 449 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZCCHC23Q6ZST2 131 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 NOP9Q86U38 636 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 STKLD1Q8NE28 680 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 FAM84AQ96KN4 292 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 TRIM56Q9BRZ2 755 aaKnown RBP10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 SENP1Q9P0U3 644 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 SPEF2Q9C093 1822 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 PRR5-ARHGAP8B1AHC4 643 aa10.25□□□□□ -0.77
TNFAIP3-210ENST00000620204 H0YIN7 160 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms