RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 CDC16Q13042 620 aa16.67■□□□□ 0.26
SEMA3B-214ENST00000619119 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
SEMA3B-214ENST00000619119 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.67■□□□□ 0.261e-12■□□□□ 9.5
SEMA3B-214ENST00000619119 AGAP3Q96P47 875 aa16.67■□□□□ 0.26
SEMA3B-214ENST00000619119 EDEM3Q9BZQ6 932 aa16.67■□□□□ 0.26
SEMA3B-214ENST00000619119 ANKRD63C9JTQ0 380 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 TRAFD1O14545 582 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 P4HA2O15460 535 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 ZNF862O60290 1169 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 SP4Q02446 784 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 KLHL35Q6PF15 583 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 B3GNT6Q6ZMB0 384 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 NLRP9Q7RTR0 991 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 GAB3Q8WWW8 586 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 GSC2O15499 205 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 RARGP13631 454 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 HOXD13P35453 343 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 MOGSQ13724 837 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 PGM5Q15124 567 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 DCAF12L1Q5VU92 463 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 SPON1Q9HCB6 807 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 ZNF112Q9UJU3 913 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 TBC1D30Q9Y2I9 924 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 STARD13Q9Y3M8 1113 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 PCNTO95613 3336 aa16.66■□□□□ 0.26
SEMA3B-214ENST00000619119 POLR2AP24928 1970 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 ARFIP2P53365 341 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 EMP3P54852 163 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 WDR4P57081 412 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 ROPN1BQ9BZX4 212 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 ROPN1Q9HAT0 212 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 ARL8BQ9NVJ2 186 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 DCTN4Q9UJW0 460 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 NUMBLQ9Y6R0 609 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 CCDC22O60826 627 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 TROVE2P10155 538 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 EPHA7Q15375 998 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 ZNF362Q5T0B9 420 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 DEPTORQ8TB45 409 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 C10orf82Q8WW14 230 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 PPP2R3CQ969Q6 453 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 BTBD10Q9BSF8 475 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 STK33Q9BYT3 514 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 NPHS2Q9NP85 383 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 STXBP5LQ9Y2K9 1186 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 STK24Q9Y6E0 443 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 SMIM31A0A1B0GVY4 71 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 TXNDC9O14530 226 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 STK10O94804 968 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 HALP42357 657 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 LMNB2Q03252 620 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 KNOP1Q1ED39 458 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 LRRC43Q8N309 656 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 SYN2Q92777 582 aaPredicted RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 FAM161BQ96MY7 647 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 RUNDC3BQ96NL0 473 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 SERPINB12Q96P63 405 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 NACC1Q96RE7 527 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 NAGPAQ9UK23 515 aa16.65■□□□□ 0.26
SEMA3B-214ENST00000619119 PSMD7P51665 324 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 DHX34Q14147 1143 aaKnown RBP16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 TMEM132BQ14DG7 1078 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 KCTD21Q4G0X4 260 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 CLNKQ7Z7G1 428 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 RSPH1Q8WYR4 309 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 MPHOSPH6Q99547 160 aaKnown RBP16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 PDCD2LQ9BRP1 358 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 OSGEPQ9NPF4 335 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 PXMP2Q9NR77 195 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 NDE1Q9NXR1 346 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 ARHGEF35A5YM69 484 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 SLC26A4O43511 780 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 ADCY3O60266 1144 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 ANPEPP15144 967 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 PPP1R21Q6ZMI0 780 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 TCHPQ9BT92 498 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 GINM1Q9NU53 330 aa16.64■□□□□ 0.25
SEMA3B-214ENST00000619119 DHX15O43143 795 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 COL6A2P12110 1019 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 ACTN1P12814 892 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 SERPINB8P50452 374 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 VGLL4Q14135 290 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 COG2Q14746 738 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 DGCR14Q96DF8 476 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 HES6Q96HZ4 224 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 TMED5Q9Y3A6 229 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
SEMA3B-214ENST00000619119 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms