RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.57□□□□□ -0.08
CNOT3-210ENST00000618939 ERAP1Q9NZ08 941 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 SLC25A27O95847 323 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 KRT4P19013 534 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 OTUD4Q01804 1114 aaKnown RBP14.57□□□□□ -0.08
CNOT3-210ENST00000618939 FAM71AQ8IYT1 594 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 RNF139Q8WU17 664 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 ZNF606Q8WXB4 792 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 TNIP3Q96KP6 325 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 FAM167BQ9BTA0 163 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 ZFATQ9P243 1243 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 C5P01031 1676 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 CFLARO15519 480 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 DIAPH2O60879 1101 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 LSM8O95777 96 aaKnown RBP14.57□□□□□ -0.08
CNOT3-210ENST00000618939 MARCKSL1P49006 195 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 NLRP11P59045 1033 aaKnown RBP14.57□□□□□ -0.08
CNOT3-210ENST00000618939 CEP120Q8N960 986 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 HDAC11Q96DB2 347 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
CNOT3-210ENST00000618939 ORC1Q13415 861 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 MORF4L2Q15014 288 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 WDR49Q8IV35 697 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 DCLK2Q8N568 766 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 PRELID2Q8N945 189 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 SHC3Q92529 594 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 TMEM121Q9BTD3 319 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 SMYD3Q9H7B4 428 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 CD248Q9HCU0 757 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 PFDN4Q9NQP4 134 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 CHST7Q9NS84 486 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
CNOT3-210ENST00000618939 VCPIP1Q96JH7 1222 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 MAGEB18Q96M61 343 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 KDM4CQ9H3R0 1056 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 NOD2Q9HC29 1040 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 UBIAD1Q9Y5Z9 338 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 ATP8B3O60423 1300 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 DISP2A7MBM2 1401 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 MYL3P08590 195 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 EPHB1P54762 984 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 STX1BP61266 288 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 ART3Q13508 389 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 FSCBQ5H9T9 825 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 MPZL3Q6UWV2 235 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 SERPINI1Q99574 410 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 EPS15L1Q9UBC2 864 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 NAALADL1Q9UQQ1 740 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 MYH2Q9UKX2 1941 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 ARHGEF37A1IGU5 675 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 PPFIA2O75334 1257 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 SNRPAP09012 282 aaKnown RBP14.56□□□□□ -0.08
CNOT3-210ENST00000618939 AKT1S1Q96B36 256 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 PHTF1Q9UMS5 762 aa14.56□□□□□ -0.08
CNOT3-210ENST00000618939 CASQ2O14958 399 aaPredicted RBP14.55□□□□□ -0.08
CNOT3-210ENST00000618939 CCND1P24385 295 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 CLCN3P51790 818 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 BOLA3Q53S33 107 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 LONP2Q86WA8 852 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 TMEM161BQ8NDZ6 487 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 ACTL9Q8TC94 416 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 PPP1R12AO14974 1030 aaPredicted RBP14.55□□□□□ -0.08
CNOT3-210ENST00000618939 GH1P01241 217 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 PDHA1P08559 390 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 DSG3P32926 999 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 GRAMD1BQ3KR37 738 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 BBS5Q8N3I7 341 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 SLC16A10Q8TF71 515 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 ALG3Q92685 438 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 RNF181Q9P0P0 153 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 RGPD5Q99666 1765 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 PGM1P36871 562 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 DUPD1Q68J44 220 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 PACS2Q86VP3 889 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 FRMD8P1Q9BZ68 369 aaPredicted RBP14.55□□□□□ -0.08
CNOT3-210ENST00000618939 MARCOQ9UEW3 520 aaPredicted RBP14.55□□□□□ -0.08
CNOT3-210ENST00000618939 PCYOX1Q9UHG3 505 aa14.55□□□□□ -0.08
CNOT3-210ENST00000618939 UBOX5O94941 541 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 PDGFRBP09619 1106 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 DRG2P55039 364 aaKnown RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 ANKRD20A8PQ5CZ79 823 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 EMC1Q8N766 993 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 ZBTB45Q96K62 511 aaPredicted RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 MANSC1Q9H8J5 431 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 PCMTD2Q9NV79 361 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 PFDN6O15212 129 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 COG7P83436 770 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 FMO1Q01740 532 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 RASSF3Q86WH2 238 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 FBXO36Q8NEA4 188 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 VPS39Q96JC1 886 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 TTC1Q99614 292 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 SLC12A6Q9UHW9 1150 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 PIN4Q9Y237 131 aaKnown RBP14.54□□□□□ -0.08
CNOT3-210ENST00000618939 SHBGP04278 402 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 GNAT1P11488 350 aa14.54□□□□□ -0.08
CNOT3-210ENST00000618939 SERPINB9P50453 376 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms