RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TEX28O15482 410 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 ARHGAP6O43182 974 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 AP5Z1O43299 807 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 DCXO43602 365 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CLASP2O75122 1294 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 XYLBO75191 536 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 B3GAT3O94766 335 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 OAZ2O95190 189 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SLU7O95391 586 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 VNN2O95498 520 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 FGF19O95750 216 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 GLP2RO95838 553 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 HLA-DRAP01903 254 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 ITGB3P05106 788 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CNPP09543 421 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 PSMC2P35998 433 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 GCLMP48507 274 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 VAMP7P51809 220 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CDR1P51861 262 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 AP3M2P53677 418 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 MYL6P60660 151 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 FKBP3Q00688 224 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 MYL5Q02045 173 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 TFF2Q03403 129 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 DLX2Q07687 328 aaPredicted RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 RAB33AQ14088 237 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 MRPL58Q14197 206 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 ZACNQ401N2 412 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CBWD6Q4V339 395 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CBWD3Q5JTY5 395 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CBWD5Q5RIA9 395 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 FAM171A1Q5VUB5 890 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SPOPLQ6IQ16 392 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SLC8B1Q6J4K2 584 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SV2AQ7L0J3 742 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 DPH6Q7L8W6 267 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 GPR149Q86SP6 731 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 TRIM59Q8IWR1 403 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CSGALNACT2Q8N6G5 542 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF461Q8TAF7 563 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 LNX1Q8TBB1 728 aaPredicted RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 TAS1R2Q8TE23 839 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 C2orf15Q8WU43 125 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SLC22A17Q8WUG5 538 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SLC35C1Q96A29 364 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 FAXDC2Q96IV6 333 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SENP8Q96LD8 212 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 KLHL5Q96PQ7 755 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 TMEM209Q96SK2 561 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 TSG101Q99816 390 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 CLSTN3Q9BQT9 956 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 MKNK1Q9BUB5 465 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 SDCBP2Q9H190 292 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 S1PR5Q9H228 398 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 L2HGDHQ9H9P8 463 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 APOBEC3GQ9HC16 384 aaKnown RBP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.63□□□□□ -1.51
SHMT1-211ENST00000618902 IGSF9Q9P2J2 1179 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 RWDD2AQ9UIY3 292 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 PYCARDQ9ULZ3 195 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 L1RE1Q9UN81 338 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 POLIQ9UNA4 740 aa5.63□□□□□ -1.51
SHMT1-211ENST00000618902 MTCL1Q9Y4B5 1905 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 OR6C75A6NL08 312 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PRR33A8MZF0 331 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 H3BQ06 376 aaPredicted RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 SLC16A3O15427 465 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TBX10O75333 385 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TMEM191BP0C7N4 346 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 EPB41P11171 864 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 EPCAMP16422 314 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TNNI1P19237 187 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TYMPP19971 482 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 RPL13P26373 211 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PPP1R2P41236 205 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 MARSP56192 900 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 UBASH3AP57075 661 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 RBP5P82980 135 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 APBA1Q02410 837 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 BFSP1Q12934 665 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PLD1Q13393 1074 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 STIM1Q13586 685 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 DUOXA2Q1HG44 320 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 FILIP1LQ4L180 1135 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 HSP90AA4PQ58FG1 418 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 VARS2Q5ST30 1063 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 LIN9Q5TKA1 542 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 WSCD1Q658N2 575 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 DPY19L2P1Q6NXN4 242 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 C1orf228Q6PIY5 440 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 INTS8Q75QN2 995 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 APTXQ7Z2E3 356 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 RBM23Q86U06 439 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TMEM86AQ8N2M4 240 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 LRRC52Q8N7C0 313 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF397Q8NF99 534 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms