RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 PTPRHQ9HD43 1115 aa17.78■□□□□ 0.44
SEMA3B-213ENST00000618865 PDGFCQ9NRA1 345 aa17.78■□□□□ 0.44
SEMA3B-213ENST00000618865 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-213ENST00000618865 A0A0G2JLL6 359 aaPredicted RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 NOP56O00567 594 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 CDR1P51861 262 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 CDH8P55286 799 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 TRPC3Q13507 836 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 SGSM1Q2NKQ1 1148 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 ZNF699Q32M78 642 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 GKAP1Q5VSY0 366 aaPredicted RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 VSTM1Q6UX27 236 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 PRRT2Q7Z6L0 340 aaPredicted RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 ARHGEF2Q92974 986 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 PPP1R16BQ96T49 567 aa17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 ROPN1BQ9BZX4 212 aaPredicted RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 ROPN1Q9HAT0 212 aaPredicted RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 DICER1Q9UPY3 1922 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-213ENST00000618865 INO80B-WBP1J3KQ70 363 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 LGR5O75473 907 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 CXCL8P10145 99 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 PROZP22891 400 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 GRM1Q13255 1194 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 ZBTB8OSQ8IWT0 167 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 SPATA33Q96N06 139 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 PAIP2Q9BPZ3 127 aaKnown RBP17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 INO80BQ9C086 356 aaPredicted RBP17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 RBPJLQ9UBG7 517 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 TBK1Q9UHD2 729 aa17.77■□□□□ 0.43
SEMA3B-213ENST00000618865 ATP2C2O75185 946 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 MPP2Q14168 576 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 HP1BP3Q5SSJ5 553 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 KCNV1Q6PIU1 500 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 SPOCD1Q6ZMY3 1216 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 FAM167AQ96KS9 214 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 GOLGA8SH3BPF8 625 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 CALB1P05937 261 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 CALRP27797 417 aaKnown RBP17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 AP3M2P53677 418 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 ACTN3Q08043 901 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 MXD4Q14582 209 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 ATF7IP2Q5U623 682 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 HIBCHQ6NVY1 386 aaPredicted RBP17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 MPZL3Q6UWV2 235 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 CCDC13Q8IYE1 715 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 TMEM35BQ8NCS4 154 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 SERPINB12Q96P63 405 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 SDCBP2Q9H190 292 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 C10orf88Q9H8K7 445 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 HOMER3Q9NSC5 361 aa17.76■□□□□ 0.43
SEMA3B-213ENST00000618865 KLHL33A6NCF5 533 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 PTPN20Q4JDL3 420 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 GJC2Q5T442 439 aaPredicted RBP17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CCDC121Q6ZUS5 278 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 SUGP1Q8IWZ8 645 aaKnown RBP17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 RCOR2Q8IZ40 523 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CCDC89Q8N998 374 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 JOSD2Q8TAC2 188 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 SAE1Q9UBE0 346 aaPredicted RBP17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 HMGXB4Q9UGU5 601 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 SIX4Q9UIU6 781 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 TMEM120BA0PK00 339 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 LSM8O95777 96 aaKnown RBP17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 GH1P01241 217 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 KRT19P08727 400 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 RFC1P35251 1148 aaPredicted RBP17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 ADCY1Q08828 1119 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 SMTNL2Q2TAL5 461 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CROCCP2Q86T23 111 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 ERICH1Q86X53 443 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 ARFGAP1Q8N6T3 406 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 TCP11Q8WWU5 503 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 RNPEPQ9H4A4 650 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 SBF1O95248 1867 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 NFICP08651 508 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CAV1Q03135 178 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 WDR78Q5VTH9 848 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CYP4F22Q6NT55 531 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 EFCAB12Q6NXP0 572 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 TWNKQ96RR1 684 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 CDT1Q9H211 546 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 FZD8Q9H461 694 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 ZNF148Q9UQR1 794 aa17.75■□□□□ 0.43
SEMA3B-213ENST00000618865 hCG_1818297A0A087WSY0 165 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 ACKR2O00590 384 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 VIMP08670 466 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 CD19P15391 556 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 IGBP1P78318 339 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 MBTD1Q05BQ5 628 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 FASTKD3Q14CZ7 662 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 ANKRD20A8PQ5CZ79 823 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 ANKRD42Q8N9B4 389 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 RBM41Q96IZ5 413 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 ELAC2Q9BQ52 826 aaKnown RBP17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 STMN4Q9H169 189 aaPredicted RBP17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 LRRD1A4D1F6 860 aa17.74■□□□□ 0.43
SEMA3B-213ENST00000618865 GPR25O00155 361 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms