RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 PLS3P13797 630 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 HOXD13P35453 343 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 ETF1P62495 437 aaKnown RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 CCZ1BP86790 482 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 CCZ1P86791 482 aaPredicted RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 TRIM60Q495X7 471 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 CEP128Q6ZU80 1094 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 RSRC2Q7L4I2 434 aaKnown RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 DGLUCYQ7Z3D6 616 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 SCLYQ96I15 445 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 ZNF180Q9UJW8 692 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 KAT6AQ92794 2004 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 NRCAMQ92823 1304 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 KATNA1O75449 491 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 MYBL1P10243 752 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 DNM2P50570 870 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 PLOD1Q02809 727 aaPredicted RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 ZNF658Q5TYW1 1059 aaPredicted RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 SCG3Q8WXD2 468 aaKnown RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 PPP1R13BQ96KQ4 1090 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 NDNQ99608 321 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 TARS2Q9BW92 718 aaKnown RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 OSBPL1AQ9BXW6 950 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 SEMA6BQ9H3T3 888 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 ACTR5Q9H9F9 607 aaPredicted RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 GTF2IRD1Q9UHL9 959 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 POLG2Q9UHN1 485 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 L1RE1Q9UN81 338 aa12.76□□□□□ -0.37
SRRT-216ENST00000618262 TMA7Q9Y2S6 64 aaKnown RBP12.76□□□□□ -0.37
SRRT-216ENST00000618262 MSCO60682 206 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 FBXO21O94952 628 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 TCERG1LQ5VWI1 586 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 MCPH1Q8NEM0 835 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 SPATA20Q8TB22 786 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 PSKH2Q96QS6 385 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 SEMA4AQ9H3S1 761 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 Q9Y3F1 56 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 ASB3Q9Y575 518 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 ARPC4-TTLL3A0A0A6YYG9 625 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 CLASP2O75122 1294 aaKnown RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 GHRP10912 638 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 TMOD1P28289 359 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 SLC26A2P50443 739 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 SPAG1Q07617 926 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 KLC1Q07866 573 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 MAPRE1Q15691 268 aaKnown RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 RNF187Q5TA31 235 aaPredicted RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 ZNF720Q7Z2F6 126 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 TCF12Q99081 682 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 KATNAL1Q9BW62 490 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 HES2Q9Y543 173 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 ANKRD63C9JTQ0 380 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 K7ERI5 159 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 HAS3O00219 553 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 EIF3HO15372 352 aaKnown RBP eCLIP12.75□□□□□ -0.37
SRRT-216ENST00000618262 GLULP15104 373 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 CES1P23141 567 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 CHKAP35790 457 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 POLE2P56282 527 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 ZNF484Q5JVG2 852 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 RBM43Q6ZSC3 357 aaKnown RBP12.75□□□□□ -0.37
SRRT-216ENST00000618262 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 RNF169Q8NCN4 708 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 ZNF570Q96NI8 536 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 CBWD1Q9BRT8 395 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 L3MBTL1Q9Y468 752 aa12.75□□□□□ -0.37
SRRT-216ENST00000618262 WDR81Q562E7 1941 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 A0A1W2PRQ8 180 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 FAM170AA1A519 330 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 STAMBPO95630 424 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 HNRNPCP07910 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
SRRT-216ENST00000618262 HOXD8P13378 290 aaPredicted RBP12.74□□□□□ -0.37
SRRT-216ENST00000618262 SYN1P17600 705 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 DDX5P17844 614 aaKnown RBP12.74□□□□□ -0.37
SRRT-216ENST00000618262 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
SRRT-216ENST00000618262 GSTM4Q03013 218 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 DEFB128Q7Z7B8 93 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 LURAP1LQ8IV03 231 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 CHPFQ8IZ52 775 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 GOLM1Q8NBJ4 401 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 TMEM161BQ8NDZ6 487 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
SRRT-216ENST00000618262 RMND1Q9NWS8 449 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms