RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 TCEAL1Q15170 157 aa21.83■■□□□ 1.08
SDHA-220ENST00000617470 RPGRIP1Q96KN7 1286 aa21.83■■□□□ 1.08
SDHA-220ENST00000617470 SLC9A7Q96T83 725 aa21.83■■□□□ 1.08
SDHA-220ENST00000617470 TUBGCP4Q9UGJ1 667 aa21.83■■□□□ 1.08
SDHA-220ENST00000617470 DERAQ9Y315 318 aa21.83■■□□□ 1.08
SDHA-220ENST00000617470 TRIP11Q15643 1979 aa21.83■■□□□ 1.08
SDHA-220ENST00000617470 XPOTO43592 962 aaKnown RBP21.82■■□□□ 1.08
SDHA-220ENST00000617470 KIF4AO95239 1232 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 RHOXF2BP0C7M4 288 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 GRIK3Q13003 919 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 PTPROQ16827 1216 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 NT5DC3Q86UY8 548 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 NT5DC4Q86YG4 428 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 BEST2Q8NFU1 509 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 PPP1R10Q96QC0 940 aaKnown RBP21.82■■□□□ 1.08
SDHA-220ENST00000617470 RHOXF2Q9BQY4 288 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 GOLGA2P5Q9HBQ8 144 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 SLC38A7Q9NVC3 462 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 TBC1D13Q9NVG8 400 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 KANSL3Q9P2N6 904 aa21.82■■□□□ 1.08
SDHA-220ENST00000617470 UBQLN1Q9UMX0 589 aaKnown RBP21.82■■□□□ 1.08
SDHA-220ENST00000617470 RRP9O43818 475 aaKnown RBP21.81■■□□□ 1.08
SDHA-220ENST00000617470 CLSTN1O94985 981 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 DNA2P51530 1060 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 HADHBP55084 474 aaKnown RBP21.81■■□□□ 1.08
SDHA-220ENST00000617470 FAM193BQ96PV7 902 aaPredicted RBP21.81■■□□□ 1.08
SDHA-220ENST00000617470 XYLT2Q9H1B5 865 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 DPP3Q9NY33 737 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 RALGAPA2Q2PPJ7 1873 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 GJB5O95377 273 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 KRT19P08727 400 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 TBXAS1P24557 533 aaPredicted RBP21.81■■□□□ 1.08
SDHA-220ENST00000617470 GPC5P78333 572 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 ITIH3Q06033 890 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 C2orf54Q08AI8 447 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 RPS6KA1Q15418 735 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 HERC6Q8IVU3 1022 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 TSPAN18Q96SJ8 248 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 MRPL9Q9BYD2 267 aaKnown RBP21.81■■□□□ 1.08
SDHA-220ENST00000617470 RAB21Q9UL25 225 aa21.81■■□□□ 1.08
SDHA-220ENST00000617470 INPPL1O15357 1258 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 SOX4Q06945 474 aaPredicted RBP21.8■■□□□ 1.08
SDHA-220ENST00000617470 ZBTB6Q15916 424 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 CLEC16AQ2KHT3 1053 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 RASIP1Q5U651 963 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 DAAM2Q86T65 1068 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 ZNF280BQ86YH2 543 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 SPATA4Q8NEY3 305 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 PHOSPHO2Q8TCD6 241 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 CACNG4Q9UBN1 327 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 CHORDC1Q9UHD1 332 aaPredicted RBP21.8■■□□□ 1.08
SDHA-220ENST00000617470 PCDHB4Q9Y5E5 795 aa21.8■■□□□ 1.08
SDHA-220ENST00000617470 CASTOR2A6NHX0 329 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 CFHP08603 1231 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 UNGP13051 313 aaPredicted RBP21.79■■□□□ 1.08
SDHA-220ENST00000617470 ZNF132P52740 706 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 BTG3Q14201 252 aaPredicted RBP21.79■■□□□ 1.08
SDHA-220ENST00000617470 ACAD10Q6JQN1 1059 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 TMEM270Q6UE05 265 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 C1orf127Q8N9H9 656 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 CXorf38Q8TB03 319 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 HCSTQ9UBK5 93 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 SIX4Q9UIU6 781 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 ATMINO43313 823 aaPredicted RBP21.79■■□□□ 1.08
SDHA-220ENST00000617470 TLL1O43897 1013 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 ITGB3P05106 788 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 SGSM1Q2NKQ1 1148 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 SPOUT1Q5T280 376 aaKnown RBP21.79■■□□□ 1.08
SDHA-220ENST00000617470 PEX26Q7Z412 305 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 RHOT2Q8IXI1 618 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 SYCE1Q8N0S2 351 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 LRRC43Q8N309 656 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 RBBP8NLQ8NC74 664 aaPredicted RBP21.79■■□□□ 1.08
SDHA-220ENST00000617470 HES6Q96HZ4 224 aa21.79■■□□□ 1.08
SDHA-220ENST00000617470 PDE4DIPQ5VU43 2346 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 DDHD2O94830 711 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 CYP1A2P05177 515 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 BPIFB4P59827 614 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 TUSC3Q13454 348 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 TRPC3Q13507 836 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 ZNF677Q86XU0 584 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 MMGT1Q8N4V1 131 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 ZNF689Q96CS4 500 aaPredicted RBP21.78■■□□□ 1.08
SDHA-220ENST00000617470 IMPG2Q9BZV3 1241 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 INSL6Q9Y581 213 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 PTPRSQ13332 1948 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 GRXCR1A8MXD5 290 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 CES2O00748 559 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 MTA2O94776 668 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 CYP3A5P20815 502 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 POLR2BP30876 1174 aaKnown RBP21.78■■□□□ 1.08
SDHA-220ENST00000617470 NIF3L1Q9GZT8 377 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 RNF14Q9UBS8 474 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 DNAJB4Q9UDY4 337 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 ITGA11Q9UKX5 1188 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 AGAP1Q9UPQ3 857 aa21.78■■□□□ 1.08
SDHA-220ENST00000617470 KCNK3O14649 394 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 CYP1A1P04798 512 aaPredicted RBP21.77■■□□□ 1.08
SDHA-220ENST00000617470 RABGGTBP53611 331 aa21.77■■□□□ 1.08
SDHA-220ENST00000617470 CFAP221Q4G0U5 840 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms