RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 PCDHB2Q9Y5E7 798 aa12.09□□□□□ -0.47
PCDHGA9-202ENST00000616887 HTTP42858 3142 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 H0YGN5 161 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 MAP3K13O43283 966 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 ADCY6O43306 1168 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 C22orf31O95567 290 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 LDHAP00338 332 aaKnown RBP12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 HOXC6P09630 235 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 CCND1P24385 295 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 TAF11Q15544 211 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZPBP2Q6X784 338 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 PRELID2Q8N945 189 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 GPRC5AQ8NFJ5 357 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 LRRC4CQ9HCJ2 640 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 NFS1Q9Y697 457 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 CFAP73A6NFT4 308 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 TMEM88BA6NKF7 163 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 CCDC188H7C350 402 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 THAP12O43422 761 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 MTA2O94776 668 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 LUC7L3O95232 432 aaKnown RBP12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 GSTA1P08263 222 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 PAEPP09466 180 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 PYGBP11216 843 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 NQO1P15559 274 aaKnown RBP12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 RAP1GAPP47736 663 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 KCNJ1P48048 391 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 GCLCP48506 637 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 APLP1P51693 650 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 MXRA7P84157 204 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 MBTD1Q05BQ5 628 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 UAP1Q16222 522 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 LRIG3Q6UXM1 1119 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 RUFY4Q6ZNE9 571 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 ENOSF1Q7L5Y1 443 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 SMARCAD1Q9H4L7 1026 aa12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
PCDHGA9-202ENST00000616887 EVPLQ92817 2033 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 A0A087WZ62 844 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 OGTO15294 1046 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 RNF8O76064 485 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 CYP1A1P04798 512 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 ALADP13716 330 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 MAPK4P31152 587 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 GJC1P36383 396 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 NSFP46459 744 aaKnown RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 EFNA5P52803 228 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 PTENP60484 403 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 NOMO3P69849 1222 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 MCL1Q07820 350 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 MXD4Q14582 209 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF792Q3KQV3 632 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 PPP1R15BQ5SWA1 713 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 UBAP2Q5T6F2 1119 aaKnown RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 ATF7IP2Q5U623 682 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 MON1BQ7L1V2 547 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 UBL4BQ8N7F7 174 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 MORC4Q8TE76 937 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 TEKT4Q8WW24 435 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 KCNN1Q92952 543 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 LENG1Q96BZ8 264 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 FAM118BQ9BPY3 351 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 FDXACB1Q9BRP7 624 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 CDT1Q9H211 546 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 IFT122Q9HBG6 1241 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 CHCHD3Q9NX63 227 aaKnown RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 GGT7Q9UJ14 662 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 POLIQ9UNA4 740 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 STK38LQ9Y2H1 464 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 GPR25O00155 361 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 COQ9O75208 318 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 ASS1P00966 412 aaKnown RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 NFICP08651 508 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 FGFR4P22455 802 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 ABCD1P33897 745 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 HUNKP57058 714 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 C1QTNF8P60827 252 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 DR1Q01658 176 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 SPATA21Q7Z572 469 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 SAPCD2Q86UD0 394 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 GALNT15Q8N3T1 639 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 UBLCP1Q8WVY7 318 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 NAF1Q96HR8 494 aaKnown RBP12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 PTPN18Q99952 460 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 PTPRHQ9HD43 1115 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 KLHL11Q9NVR0 708 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 PTPN22Q9Y2R2 807 aa12.07□□□□□ -0.48
PCDHGA9-202ENST00000616887 LRRD1A4D1F6 860 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 SNAI1O95863 264 aaPredicted RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TCF4P15884 667 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 ATP2A2P16615 1042 aaKnown RBP12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 PROZP22891 400 aa12.06□□□□□ -0.48
PCDHGA9-202ENST00000616887 TUBP50607 506 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms