RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 GRAMD4Q6IC98 578 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 MOXD1Q6UVY6 613 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 PARP9Q8IXQ6 854 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 XPO6Q96QU8 1125 aaKnown RBP18.49■□□□□ 0.55
ATXN2-227ENST00000616825 ACO1P21399 889 aaKnown RBP18.49■□□□□ 0.55
ATXN2-227ENST00000616825 PDIA6Q15084 440 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 ICE2Q659A1 982 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 KIAA1257Q9ULG3 409 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 PPP1R3GB7ZBB8 358 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 AGBL2Q5U5Z8 902 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 PKN3Q6P5Z2 889 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 ENGASEQ8NFI3 743 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
ATXN2-227ENST00000616825 KLHL2O95198 593 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 ITGA8P53708 1063 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 MKRN4PQ13434 485 aaPredicted RBP18.49■□□□□ 0.55
ATXN2-227ENST00000616825 CUL2Q13617 745 aa18.49■□□□□ 0.55
ATXN2-227ENST00000616825 KLF6Q99612 283 aaPredicted RBP18.49■□□□□ 0.55
ATXN2-227ENST00000616825 RIBC1Q8N443 379 aaPredicted RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 SLC25A41Q8N5S1 370 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 C1orf131Q8NDD1 294 aaKnown RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 PRMT6Q96LA8 375 aaPredicted RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 OSBPL1AQ9BXW6 950 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 TMEM161AQ9NX61 479 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 STX7O15400 261 aaKnown RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 KRT16P08779 473 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 C16orf87Q6PH81 154 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 DDX42Q86XP3 938 aaKnown RBP eCLIP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 NUP93Q8N1F7 819 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 CD274Q9NZQ7 290 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 GGT7Q9UJ14 662 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 TMEM120BA0PK00 339 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 ANXA9O76027 345 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 ACAD10Q6JQN1 1059 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 TRIM65Q6PJ69 517 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 SLC13A5Q86YT5 568 aaPredicted RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 CD302Q8IX05 232 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 AGGF1Q8N302 714 aaeCLIP18.48■□□□□ 0.554e-6■■□□□ 11.8
ATXN2-227ENST00000616825 METTL5Q9NRN9 209 aaKnown RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.48■□□□□ 0.551e-6■■■□□ 16.3
ATXN2-227ENST00000616825 ABI2Q9NYB9 513 aaPredicted RBP18.48■□□□□ 0.55
ATXN2-227ENST00000616825 CDY2AQ9Y6F7 541 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 CDY1Q9Y6F8 540 aa18.48■□□□□ 0.55
ATXN2-227ENST00000616825 CHRM3P20309 590 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 ERFP50548 548 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 CNGA3Q16281 694 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 PPIL6Q8IXY8 311 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 TMA16Q96EY4 203 aaKnown RBP18.47■□□□□ 0.55
ATXN2-227ENST00000616825 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.47■□□□□ 0.557e-10■□□□□ 10.9
ATXN2-227ENST00000616825 CLCA2Q9UQC9 943 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 A0A087X0T9 212 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 FAM228BP0C875 321 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 ALDH7A1P49419 539 aaKnown RBP18.47■□□□□ 0.55
ATXN2-227ENST00000616825 CCDC15Q0P6D6 951 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 NFIAQ12857 509 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 LRRC6Q86X45 466 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 ERO1BQ86YB8 467 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 ARHGAP18Q8N392 663 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 CMTM5Q96DZ9 223 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 OLFM3Q96PB7 478 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 CELF4Q9BZC1 486 aaKnown RBP18.47■□□□□ 0.55
ATXN2-227ENST00000616825 ISCUQ9H1K1 167 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 OLFML3Q9NRN5 406 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 H0Y626 953 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 FOXN3O00409 490 aaPredicted RBP18.47■□□□□ 0.55
ATXN2-227ENST00000616825 SLC37A4O43826 429 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 TRIM16O95361 564 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 TMEM132BQ14DG7 1078 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 FAM71DQ8N9W8 422 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 VPS37AQ8NEZ2 397 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 OR2W6PQ8NHA6 318 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 KLC4Q9NSK0 619 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 DOLKQ9UPQ8 538 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.47■□□□□ 0.55
ATXN2-227ENST00000616825 PHF20L1A8MW92 1017 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
ATXN2-227ENST00000616825 SLC15A2Q16348 729 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 LRRC8BQ6P9F7 803 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 LINC00523Q86TU6 105 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 RFWD2Q8NHY2 731 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 OTULINQ96BN8 352 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 ERP27Q96DN0 273 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 VPS9D1Q9Y2B5 631 aa18.47■□□□□ 0.55
ATXN2-227ENST00000616825 EFCAB14O75071 495 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 COILP38432 576 aaPredicted RBP18.46■□□□□ 0.55
ATXN2-227ENST00000616825 FNTAP49354 379 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 MED21Q13503 144 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 EFL1Q7Z2Z2 1120 aaKnown RBP18.46■□□□□ 0.55
ATXN2-227ENST00000616825 STX19Q8N4C7 294 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 ZKSCAN4Q969J2 545 aaPredicted RBP18.46■□□□□ 0.55
ATXN2-227ENST00000616825 PMPCBO75439 489 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 F9P00740 461 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 KLK7P49862 253 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 CBWD2Q8IUF1 395 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 MMGT1Q8N4V1 131 aa18.46■□□□□ 0.55
ATXN2-227ENST00000616825 NOA1Q8NC60 698 aaKnown RBP18.46■□□□□ 0.55
ATXN2-227ENST00000616825 ZDHHC15Q96MV8 337 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms