RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 CDR2Q01850 454 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ARID5AQ03989 594 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 CNGA2Q16280 664 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ARHGAP17Q68EM7 881 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 KIAA1841Q6NSI8 718 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 TDHQ8IZJ6 230 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 TMEM130Q8N3G9 435 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 B3GALNT2Q8NCR0 500 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 HASPINQ8TF76 798 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ZNF606Q8WXB4 792 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 PIK3R5Q8WYR1 880 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ELMO3Q96BJ8 720 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 HEXIM2Q96MH2 286 aaKnown RBP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 AGPAT1Q99943 283 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 GPR62Q9BZJ7 368 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ZNF518BQ9C0D4 1074 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ELOVL4Q9GZR5 314 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 CHST7Q9NS84 486 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 ARHGAP20Q9P2F6 1191 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 NOCTQ9UK39 431 aaKnown RBP12.4□□□□□ -0.42
TARDBP-217ENST00000616545 PCDHGC3Q9UN70 934 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 BACE2Q9Y5Z0 518 aa12.4□□□□□ -0.42
TARDBP-217ENST00000616545 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 NT5C1B-RDH14C9J2C7 533 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 RBAK-RBAKDNI3L0D1 243 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 THAP12O43422 761 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 AKR1B10O60218 316 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 FGF18O76093 207 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 GZMAP12544 262 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 SKILP12757 684 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 CD19P15391 556 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 PTPN1P18031 435 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 TNFAIP3P21580 790 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 DSG1Q02413 1049 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 NFE2Q16621 373 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 INTS6LQ5JSJ4 861 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 PDE12Q6L8Q7 609 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 FAM171BQ6P995 826 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 LCLAT1Q6UWP7 414 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 DDX1Q92499 740 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 TGS1Q96RS0 853 aaKnown RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 CHP1Q99653 195 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 SYT15Q9BQS2 421 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 SYT11Q9BT88 431 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 C11orf84Q9BUA3 381 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-217ENST00000616545 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
TARDBP-217ENST00000616545 ATP8B3O60423 1300 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 EIF3CLB5ME19 914 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 F8W810 466 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 I3L4J1 428 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 LCA5LO95447 670 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 C1RP00736 705 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 URODP06132 367 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 PDGFRBP09619 1106 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SETSIPP0DME0 302 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 LMO2P25791 158 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 CTNNB1P35222 781 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 DEKP35659 375 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 EIF4A3P38919 411 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 GLUD2P49448 558 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SLC8A3P57103 927 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SNX16P57768 344 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 ERVK-21P61565 698 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 KRT83P78385 493 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 CCZ1BP86790 482 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 GOLGA8FQ08AF8 430 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 GOLGA8DPQ0D2H9 430 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SPA17Q15506 151 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 ASTE1Q2TB18 679 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 CTXN3Q4LDR2 81 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 ZNF571Q7Z3V5 609 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 OSTM1Q86WC4 334 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 TMEM173Q86WV6 379 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-217ENST00000616545 CEP57Q86XR8 500 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 SLC30A5Q8TAD4 765 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 MYCBPAPQ8TBZ2 947 aa12.38□□□□□ -0.43
TARDBP-217ENST00000616545 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms