RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 INPP4BO15327 924 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RBM6P78332 1123 aaKnown RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 FLCNQ8NFG4 579 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 MED8Q96G25 268 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 AKAP10O43572 662 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 COPZ1P61923 177 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 BTG3Q14201 252 aaPredicted RBP13.16□□□□□ -0.3
TCF4-248ENST00000616053 DOK6Q6PKX4 331 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 CALML6Q8TD86 181 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 RBBP8Q99708 897 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 ADCY9O60503 1353 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 ABCC12Q96J65 1359 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 CYP2C9P11712 490 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 PFKFB1P16118 471 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 STAT5BP51692 787 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 SEPT2Q15019 361 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 PPM1LQ5SGD2 360 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 NEK9Q8TD19 979 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 BBS4Q96RK4 519 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 MKNK1Q9BUB5 465 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 SERHL2Q9H4I8 314 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 SERHLQ9NQF3 203 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 NPATQ14207 1427 aa13.16□□□□□ -0.3
TCF4-248ENST00000616053 MRC2Q9UBG0 1479 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 CSF1RP07333 972 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 CXCR2P25025 360 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 POU1F1P28069 291 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 XXYLT1Q8NBI6 393 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 FATE1Q969F0 183 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 PCDHA6Q9UN73 950 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 PCDHA8Q9Y5H6 950 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 MFN2O95140 757 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 ACADLP28330 430 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 RBP5P82980 135 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 COX10Q12887 443 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 GPS1Q13098 491 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 PACS2Q86VP3 889 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 CNOT10Q9H9A5 744 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 PRKCBP05771 671 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 EPM2AIP1Q7L775 607 aaPredicted RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 IPMKQ8NFU5 416 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 ACSF2Q96CM8 615 aaPredicted RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 TMA16Q96EY4 203 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 CBX8Q9HC52 389 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 M0QYT0 321 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 M0R3G1 203 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 GUCY1B2O75343 617 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 AKT2P31751 481 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 CXCR5P32302 372 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 USP10Q14694 798 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 UNC5CLQ8IV45 518 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 PCSK9Q8NBP7 692 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 FBXO32Q969P5 355 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 UGP2Q16851 508 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 KRT24Q2M2I5 525 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 OTOAQ7RTW8 1153 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 SPATA9Q9BWV2 254 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 TBC1D3BA6NDS4 549 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 KCNN4O15554 427 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 MGRN1O60291 552 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 PTPN7P35236 360 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 GCLMP48507 274 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 EFNA5P52803 228 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 CYP51A1Q16850 503 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
TCF4-248ENST00000616053 LRCH1Q9Y2L9 728 aa13.15□□□□□ -0.3
TCF4-248ENST00000616053 VPS26AO75436 327 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 HDAC1Q13547 482 aaPredicted RBP13.15□□□□□ -0.31
TCF4-248ENST00000616053 ACOX1Q15067 660 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 DGKKQ5KSL6 1271 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 MIER2Q8N344 545 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.15□□□□□ -0.31
TCF4-248ENST00000616053 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.31
TCF4-248ENST00000616053 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 ZFP69BQ9UJL9 534 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 RPS6KA6Q9UK32 745 aa13.15□□□□□ -0.31
TCF4-248ENST00000616053 GPR182O15218 404 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 MSH3P20585 1137 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 YWHABP31946 246 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 FNTAP49354 379 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 GRAPQ13588 217 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 PGS1Q32NB8 556 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 SPATA1Q5VX52 437 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 FAM171BQ6P995 826 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 CCDC81Q6ZN84 652 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms