RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 EPHB2P29323 1055 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 RFC5P40937 340 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 RUNX1T1Q06455 604 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 TROAPQ12815 778 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 SLC10A5Q5PT55 438 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 CENPPQ6IPU0 288 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 EP400NLQ6ZTU2 488 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 VPS50Q96JG6 964 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 BTBD10Q9BSF8 475 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 ILKAPQ9H0C8 392 aaPredicted RBP19.66■□□□□ 0.74
SPAST-203ENST00000615843 SIK2Q9H0K1 926 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 DFFAO00273 331 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 ZNF668Q96K58 619 aaPredicted RBP19.66■□□□□ 0.74
SPAST-203ENST00000615843 TRAPPC9Q96Q05 1148 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 SP110Q9HB58 689 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 SLC24A2Q9UI40 661 aa19.66■□□□□ 0.74
SPAST-203ENST00000615843 GLRA3O75311 464 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 USP1O94782 785 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 DLGAP3O95886 979 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 SERPINB5P36952 375 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 SARSP49591 514 aaKnown RBP19.65■□□□□ 0.74
SPAST-203ENST00000615843 TPI1P60174 286 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 IFI35P80217 286 aaPredicted RBP19.65■□□□□ 0.74
SPAST-203ENST00000615843 LRRC74BQ6ZQY2 392 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 CASP10Q92851 521 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 SNX13Q9Y5W8 968 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 CCDC103Q8IW40 242 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 WNK4Q96J92 1243 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 EFCAB1Q9HAE3 211 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 TSR3Q9UJK0 312 aaKnown RBP19.65■□□□□ 0.74
SPAST-203ENST00000615843 MYO1GB0I1T2 1018 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 CYP19A1P11511 503 aaPredicted RBP19.65■□□□□ 0.74
SPAST-203ENST00000615843 NT5DC1Q5TFE4 455 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 PRCCQ92733 491 aaPredicted RBP19.65■□□□□ 0.74
SPAST-203ENST00000615843 NSMCE4AQ9NXX6 385 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 TMEM94Q12767 1356 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 TRPC5OSA6NMA1 111 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 BNIP3LO60238 219 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 APBA3O96018 575 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 DEPDC1Q5TB30 811 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 C4orf22Q6V702 233 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 SCFD1Q8WVM8 642 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 BRD8Q9H0E9 1235 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 V9GYQ6 96 aa19.65■□□□□ 0.74
SPAST-203ENST00000615843 TM9SF1O15321 606 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 PSMA4P25789 261 aaKnown RBP19.64■□□□□ 0.74
SPAST-203ENST00000615843 CDC25CP30307 473 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 RGS7P49802 495 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 SERPINB8P50452 374 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 KDELC2Q7Z4H8 507 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 TMPRSS6Q8IU80 811 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 MSL3Q8N5Y2 521 aaKnown RBP19.64■□□□□ 0.74
SPAST-203ENST00000615843 ACSF2Q96CM8 615 aaPredicted RBP19.64■□□□□ 0.74
SPAST-203ENST00000615843 PGM2Q96G03 612 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 AP5M1Q9H0R1 490 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 TDRD3Q9H7E2 651 aaKnown RBP19.64■□□□□ 0.74
SPAST-203ENST00000615843 AGPAT3Q9NRZ7 376 aa19.64■□□□□ 0.74
SPAST-203ENST00000615843 BGNP21810 368 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 HMOX2P30519 316 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 EFNA5P52803 228 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 SWT1Q5T5J6 900 aaKnown RBP19.64■□□□□ 0.73
SPAST-203ENST00000615843 SNRNP48Q6IEG0 339 aaKnown RBP19.64■□□□□ 0.73
SPAST-203ENST00000615843 NOP9Q86U38 636 aaKnown RBP19.64■□□□□ 0.73
SPAST-203ENST00000615843 MYO1DO94832 1006 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 SGPL1O95470 568 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 CYP11B2P19099 503 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 EPAS1Q99814 870 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 PI4K2AQ9BTU6 479 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 ABCA6Q8N139 1617 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 CES2O00748 559 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 DGAT1O75907 488 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 SGSM1Q2NKQ1 1148 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 PLEKHA7Q6IQ23 1121 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 FAM192AQ9GZU8 254 aa19.64■□□□□ 0.73
SPAST-203ENST00000615843 EXOSC4Q9NPD3 245 aaKnown RBP19.64■□□□□ 0.73
SPAST-203ENST00000615843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 PSMD3O43242 534 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 STIP1P31948 543 aaKnown RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 SULT1E1P49888 294 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 KBTBD12Q3ZCT8 623 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 TERB1Q8NA31 727 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 AGAP11Q8TF27 550 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 MYLK2Q9H1R3 596 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 DNAJC16Q9Y2G8 782 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 UNC13BO14795 1591 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 FAM58BPP0C7Q3 252 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 OTUD4Q01804 1114 aaKnown RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 GPAT2Q6NUI2 795 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 CCDC81Q6ZN84 652 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 LDHDQ86WU2 507 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 CCDC60Q8IWA6 550 aaPredicted RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 ARHGEF1Q92888 912 aaKnown RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 AP1G2O75843 785 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 HSD17B4P51659 736 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 KCNK10P57789 538 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 SNRPFP62306 86 aaKnown RBP19.63■□□□□ 0.73
SPAST-203ENST00000615843 TATDN2Q93075 761 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 PLEKHA5Q9HAU0 1116 aa19.63■□□□□ 0.73
SPAST-203ENST00000615843 GGA2Q9UJY4 613 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms