RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SHCBP1Q8NEM2 672 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 CEP70Q8NHQ1 597 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 SP110Q9HB58 689 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 KIAA1257Q9ULG3 409 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 TRIM17Q9Y577 477 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.4■□□□□ 0.06
SNPH-203ENST00000614659 RARGP13631 454 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 GPD1P21695 349 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 EEF1B2P24534 225 aaKnown RBP15.4■□□□□ 0.06
SNPH-203ENST00000614659 OCRLQ01968 901 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 ARMC2Q8NEN0 867 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 MLXIPLQ9NP71 852 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 DSEQ9UL01 958 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 SIGLEC1Q9BZZ2 1709 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 H0Y3Z8 333 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 CFLARO15519 480 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 TNFRSF8P28908 595 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 TM4SF1P30408 202 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 TSTA3Q13630 321 aaPredicted RBP15.4■□□□□ 0.06
SNPH-203ENST00000614659 PLA2G4FQ68DD2 849 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 ANO5Q75V66 913 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 NKX2-3Q8TAU0 364 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 SH3GL3Q99963 347 aa15.4■□□□□ 0.06
SNPH-203ENST00000614659 TMEM120BA0PK00 339 aa15.39■□□□□ 0.06
SNPH-203ENST00000614659 NFIAQ12857 509 aa15.39■□□□□ 0.06
SNPH-203ENST00000614659 CAPRIN2Q6IMN6 1127 aaKnown RBP15.39■□□□□ 0.06
SNPH-203ENST00000614659 TTC23LQ6PF05 361 aa15.39■□□□□ 0.06
SNPH-203ENST00000614659 HTATIP2Q9BUP3 242 aa15.39■□□□□ 0.06
SNPH-203ENST00000614659 NT5C1AQ9BXI3 368 aa15.39■□□□□ 0.06
SNPH-203ENST00000614659 MTSS1O43312 755 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 BNIP3LO60238 219 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 TEX9Q8N6V9 391 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 RIN2Q8WYP3 895 aaPredicted RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 ZC3H7BQ9UGR2 993 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 STIP1P31948 543 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 CASP2P42575 452 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 OR1G1P47890 313 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 METTL7BQ6UX53 244 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 APBB2Q92870 758 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 PNMA5Q96PV4 448 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 ZFATQ9P243 1243 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 SULT1E1P49888 294 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 GEMIN4P57678 1058 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 PPHLN1Q8NEY8 458 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 ACER1Q8TDN7 264 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 DUSP9Q99956 384 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 MMTAG2Q9BU76 263 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 PCDHB12Q9Y5F1 795 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 LRRIQ3A6PVS8 624 aaPredicted RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 PDHA1P08559 390 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 HSD17B4P51659 736 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 KIF19Q2TAC6 998 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 GRAMD4Q6IC98 578 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 TAF2Q6P1X5 1199 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 FAM161BQ96MY7 647 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 CGRRF1Q99675 332 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 CELF4Q9BZC1 486 aaKnown RBP15.39■□□□□ 0.05
SNPH-203ENST00000614659 ATP11BQ9Y2G3 1177 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 SH3BP1Q9Y3L3 701 aa15.39■□□□□ 0.05
SNPH-203ENST00000614659 SNRPAP09012 282 aaKnown RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 ANKMY2Q8IV38 441 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 THOC1Q96FV9 657 aaKnown RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 KIFC3Q9BVG8 833 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 LACRTQ9GZZ8 138 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 PLEKHA5Q9HAU0 1116 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 MED1Q15648 1581 aaPredicted RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 ADM5C9JUS6 153 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 O00370 1275 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 KLHL2O95198 593 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 TAF6P49848 677 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 AMPD2Q01433 879 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 TMEM132BQ14DG7 1078 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 GJB7Q6PEY0 223 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 ZNF571Q7Z3V5 609 aaPredicted RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 KCNQ5Q9NR82 932 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 PHF20L1A8MW92 1017 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 FOXN3O00409 490 aaPredicted RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 AMHP03971 560 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 CYP3A4P08684 503 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 AARSP49588 968 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNPH-203ENST00000614659 RAD23BP54727 409 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 IQSEC1Q6DN90 963 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 GPAT2Q6NUI2 795 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 RAB42Q8N4Z0 105 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 OR2W6PQ8NHA6 318 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 PI4K2BG5E9Z4 385 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 SNX2O60749 519 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 TPI1P60174 286 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 YWHAHQ04917 246 aaPredicted RBP15.38■□□□□ 0.05
SNPH-203ENST00000614659 HIC1Q14526 733 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 EFTUD2Q15029 972 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNPH-203ENST00000614659 PDK1Q15118 436 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 BOLA3Q53S33 107 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 SLITRK1Q96PX8 696 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 YME1L1Q96TA2 773 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 GTSE1Q9NYZ3 720 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 FIS1Q9Y3D6 152 aa15.38■□□□□ 0.05
SNPH-203ENST00000614659 TMEM88BA6NKF7 163 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms