RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 ZNF687Q8N1G0 1237 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 CAMKK1Q8N5S9 505 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 FSIP1Q8NA03 581 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 POMGNT1Q8WZA1 660 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 MRPS31Q92665 395 aaKnown RBP7.81□□□□□ -1.16
TARDBP-216ENST00000614494 ACDQ96AP0 544 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 TCEAL4Q96EI5 215 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 TRMT2BQ96GJ1 504 aaKnown RBP7.81□□□□□ -1.16
TARDBP-216ENST00000614494 FUBP3Q96I24 572 aaKnown RBP eCLIP7.81□□□□□ -1.16
TARDBP-216ENST00000614494 ZBTB45Q96K62 511 aaPredicted RBP7.81□□□□□ -1.16
TARDBP-216ENST00000614494 ACCSQ96QU6 501 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 SEPT5Q99719 369 aaPredicted RBP7.81□□□□□ -1.16
TARDBP-216ENST00000614494 ZCWPW1Q9H0M4 648 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 CUEDC2Q9H467 287 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 ZHX3Q9H4I2 956 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 LMAN1LQ9HAT1 526 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 KIAA1586Q9HCI6 787 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 USP18Q9UMW8 372 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 PCDHB5Q9Y5E4 795 aa7.81□□□□□ -1.16
TARDBP-216ENST00000614494 CYB561D2O14569 222 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 HUS1O60921 280 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 LRRN2O75325 713 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 MOSPD3O75425 235 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CHRNB1P11230 501 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 TDGF1P13385 188 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 DRD1P21728 446 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CD72P21854 359 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CCNE1P24864 410 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 TNFSF9P41273 254 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 PPP3CCP48454 512 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 LHX1P48742 406 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 SNRPFP62306 86 aaKnown RBP7.8□□□□□ -1.16
TARDBP-216ENST00000614494 AMPD3Q01432 767 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 MYO1EQ12965 1108 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 FZD5Q13467 585 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CSRP2Q16527 193 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 MGAT5BQ3V5L5 792 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 C8orf34Q49A92 452 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CFAP221Q4G0U5 840 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 SLC39A12Q504Y0 691 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 L1TD1Q5T7N2 865 aaKnown RBP7.8□□□□□ -1.16
TARDBP-216ENST00000614494 GPR158Q5T848 1215 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 C4orf50Q6ZRC1 276 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 SV2BQ7L1I2 683 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 ZNF720Q7Z2F6 126 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CMTM8Q8IZV2 173 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 CPA6Q8N4T0 437 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 PGLYRP2Q96PD5 576 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 ACBD6Q9BR61 282 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 PYM1Q9BRP8 204 aaKnown RBP7.8□□□□□ -1.16
TARDBP-216ENST00000614494 LRRC3Q9BY71 257 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 PLA2G2FQ9BZM2 168 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 DNAJC25Q9H1X3 360 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 ZSCAN16Q9H4T2 348 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-216ENST00000614494 MRPL44Q9H9J2 332 aaKnown RBP7.8□□□□□ -1.16
TARDBP-216ENST00000614494 DPP3Q9NY33 737 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 MTF2Q9Y483 593 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-216ENST00000614494 PCDHGA5Q9Y5G8 931 aa7.8□□□□□ -1.16
TARDBP-216ENST00000614494 F5P12259 2224 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 MYH11P35749 1972 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 CEP250Q9BV73 2442 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 COL4A2P08572 1712 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 CHURC1-FNTBB4DL54 471 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 MEFVO15553 781 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 PRPF40AO75400 957 aaKnown RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 NFICP08651 508 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 FAM163BP0C2L3 166 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 HAPLN1P10915 354 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 PYGBP11216 843 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 TCF3P15923 654 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 TRIM21P19474 475 aaKnown RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 VIPR2P41587 438 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 DPP6P42658 865 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 LIMK1P53667 647 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 NR1H3Q13133 447 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 CCINQ13939 588 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 SIM2Q14190 667 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 SF3A1Q15459 793 aaKnown RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 RSPO4Q2I0M5 234 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 PREPLQ4J6C6 727 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 SEZ6Q53EL9 994 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 RRAGBQ5VZM2 374 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 VSTM1Q6UX27 236 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 GAREM2Q75VX8 874 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 CEP68Q76N32 757 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 WDR5BQ86VZ2 330 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 BRSK2Q8IWQ3 736 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 CCDC65Q8IXS2 484 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 HS6ST3Q8IZP7 471 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 SYCP3Q8IZU3 236 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 TOP6BLQ8N6T0 577 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 ATP2A3Q93084 1043 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 INTS4Q96HW7 963 aaKnown RBP7.79□□□□□ -1.16
TARDBP-216ENST00000614494 MYRFLQ96LU7 910 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 TMEM209Q96SK2 561 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 MAGEF1Q9HAY2 307 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 POLD4Q9HCU8 107 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 BLOC1S4Q9NUP1 217 aa7.79□□□□□ -1.16
TARDBP-216ENST00000614494 TDP1Q9NUW8 608 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms