RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 EFCAB8A8MWE9 144 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 ARVCFO00192 962 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 GPR37O15354 613 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 MTA2O94776 668 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 CYP1A2P05177 515 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 MYBL1P10243 752 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 GHRP10912 638 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 ITGA4P13612 1032 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 CD52P31358 61 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 NSFP46459 744 aaKnown RBP9.49□□□□□ -0.89
CCDC47-207ENST00000612558 USP46P62068 366 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 TUBB4BP68371 445 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 CENPCQ03188 943 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 PAK2Q13177 524 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF394Q53GI3 561 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 GLRA4Q5JXX5 417 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 C9orf57Q5W0N0 161 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 MRPL10Q7Z7H8 261 aaKnown RBP9.49□□□□□ -0.89
CCDC47-207ENST00000612558 DAAM2Q86T65 1068 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 C18orf25Q96B23 403 aaPredicted RBP9.49□□□□□ -0.89
CCDC47-207ENST00000612558 CYFIP2Q96F07 1278 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 TRIM11Q96F44 468 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 VCPIP1Q96JH7 1222 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 MMS19Q96T76 1030 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 UNC93B1Q9H1C4 597 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 SMYD3Q9H7B4 428 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 OSGEPQ9NPF4 335 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 CTTNBP2NLQ9P2B4 639 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 TUBGCP4Q9UGJ1 667 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 PADI3Q9ULW8 664 aa9.49□□□□□ -0.89
CCDC47-207ENST00000612558 PDCD11Q14690 1871 aaKnown RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CTAGE15A4D2H0 777 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 DNM1LO00429 736 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 PIRO00625 290 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 MED7O43513 233 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 NCK2O43639 380 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 BUB1BO60566 1050 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 SRGAP2O75044 1071 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF623O75123 536 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CILPO75339 1184 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 TADA3O75528 432 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 LSM8O95777 96 aaKnown RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 FTCDO95954 541 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CTAGE8P0CG41 777 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CKBP12277 381 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 PNPLA4P41247 253 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 RAP1GAPP47736 663 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 RAB27AP51159 221 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 RAD23BP54727 409 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CDH8P55286 799 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 NOMO3P69849 1222 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CKAP4Q07065 602 aaKnown RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 INCA1Q0VD86 236 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 LPIN1Q14693 890 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF618Q5T7W0 954 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 NAA35Q5VZE5 725 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CTAGE6Q86UF2 777 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 PHF13Q86YI8 300 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CTAGE4Q8IX94 777 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 MCOLN2Q8IZK6 566 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 WHAMMQ8TF30 809 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 CPA5Q8WXQ8 436 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 UBXN4Q92575 508 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF653Q96CK0 615 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 TMEM176AQ96HP8 235 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 OSBPL9Q96SU4 736 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 ZNF518BQ9C0D4 1074 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 SDCBP2Q9H190 292 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 TRPV6Q9H1D0 765 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 AVENQ9NQS1 362 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 PAK6Q9NQU5 681 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 SLC38A7Q9NVC3 462 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 UVRAGQ9P2Y5 699 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 BARX2Q9UMQ3 279 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 PCDHGC3Q9UN70 934 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 COG5Q9UP83 839 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 GIT1Q9Y2X7 761 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
CCDC47-207ENST00000612558 FRMPD3Q5JV73 1810 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
CCDC47-207ENST00000612558 A0A0U1RQF3 1178 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 FAM170AA1A519 330 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 J3QL48 77 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
CCDC47-207ENST00000612558 SKIP12755 728 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 SNRPBP14678 240 aaKnown RBP9.47□□□□□ -0.89
CCDC47-207ENST00000612558 BRD2P25440 801 aaKnown RBP9.47□□□□□ -0.89
CCDC47-207ENST00000612558 CDK7P50613 346 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 DSC3Q14574 896 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 RPS6KA1Q15418 735 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 LIN9Q5TKA1 542 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 PEX26Q7Z412 305 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 NT5DC3Q86UY8 548 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 PASD1Q8IV76 773 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 SLC4A11Q8NBS3 891 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 TMEM35BQ8NCS4 154 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 LRRN4CLQ8ND94 238 aa9.47□□□□□ -0.89
CCDC47-207ENST00000612558 TFAP2BQ92481 460 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms