RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 HACE1Q8IYU2 909 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CERS5Q8N5B7 392 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PRPF31Q8WWY3 499 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 TNFRSF25Q93038 417 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 FGD4Q96M96 766 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 KIF9Q9HAQ2 790 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ERVK-5Q9HDB9 667 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 MYOZ2Q9NPC6 264 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 UBP1Q9NZI7 540 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 POLIQ9UNA4 740 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ANKRD26Q9UPS8 1709 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ANGPTL3Q9Y5C1 460 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ASTN1O14525 1302 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 CNTNAP4Q9C0A0 1308 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 UBA6A0AVT1 1052 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 KIF3CO14782 793 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NVLO15381 856 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 TLR2O60603 784 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 SUPT3HO75486 399 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 APOEP02649 317 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 MYL2P10916 166 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PYGBP11216 843 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ATP6V1B1P15313 513 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PAX7P23759 505 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 HOXA7P31268 230 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 RANBP1P43487 201 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NME5P56597 212 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ITGB3BPQ13352 177 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 SURF1Q15526 300 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 Q4G0T1 1027 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 ATF7IP2Q5U623 682 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 LRRC8EQ6NSJ5 796 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 APOBEC3HQ6NTF7 200 aaKnown RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 CES3Q6UWW8 571 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 IFNEQ86WN2 208 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NUP93Q8N1F7 819 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 RNF139Q8WU17 664 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DNAJC9Q8WXX5 260 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 SLC10A4Q96EP9 437 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 PAFAH2Q99487 392 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 TUBB6Q9BUF5 446 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 WDR18Q9BV38 432 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DEFB129Q9H1M3 183 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 NEUROG2Q9H2A3 272 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DNAJC18Q9H819 358 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 KRT82Q9NSB4 513 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 DNPEPQ9ULA0 475 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 AGLP35573 1532 aa3.98□□□□□ -1.77
RNF38-210ENST00000611646 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.98□□□□□ -1.77
RNF38-210ENST00000611646 EYSQ5T1H1 3165 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 WDR46O15213 610 aaKnown RBP3.97□□□□□ -1.77
RNF38-210ENST00000611646 FANCGO15287 622 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ATP5HO75947 161 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 MT-CO1P00395 513 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 RARGP13631 454 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 DPEP1P16444 411 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 EPHB2P29323 1055 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 SERPINB5P36952 375 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ABCG1P45844 678 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 IREB2P48200 963 aaKnown RBP3.97□□□□□ -1.77
RNF38-210ENST00000611646 AARSP49588 968 aaKnown RBP eCLIP3.97□□□□□ -1.77
RNF38-210ENST00000611646 RHBDL3P58872 404 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 KCNJ2P63252 427 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 PLIN5Q00G26 463 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 VPS72Q15906 364 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ANKRD20A4Q4UJ75 823 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ANKRD20A2Q5SQ80 823 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ANKRD20A1Q5TYW2 823 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ARMCX2Q7L311 632 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ACOT1Q86TX2 421 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 PALB2Q86YC2 1186 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ZNF280CQ8ND82 737 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 FAM151AQ8WW52 585 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ZBTB10Q96DT7 871 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 SPATA17Q96L03 361 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 RIT2Q99578 217 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 CENPKQ9BS16 269 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 TEX13BQ9BXU2 312 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 AP5M1Q9H0R1 490 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 WDR70Q9NW82 654 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GGA3Q9NZ52 723 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 HACL1Q9UJ83 578 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 TRAF3IP3Q9Y228 551 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 IGSF9BQ9UPX0 1349 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GOLGA8QA0A0J9YX86 632 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 TCRBV7S2A1N4TA0A589 114 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GOLGA8OA6NCC3 632 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 F8VP50 259 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GOLGA8NF8WBI6 632 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GOLGA8TH3BQL2 631 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 MEIS2O14770 477 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GSTA4O15217 222 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 PEX10O60683 326 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 ICAM1P05362 532 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 SMARCA1P28370 1054 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 SERPINB4P48594 390 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 GMPSP49915 693 aaPredicted RBP3.97□□□□□ -1.77
RNF38-210ENST00000611646 SATB1Q01826 763 aa3.97□□□□□ -1.77
RNF38-210ENST00000611646 CYP24A1Q07973 514 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms