RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 GH1P01241 217 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 FAM228BP0C875 321 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 PLOD1Q02809 727 aaPredicted RBP16.87■□□□□ 0.29
RTN1-209ENST00000611068 CBX3Q13185 183 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 IFNL1Q8IU54 200 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.87■□□□□ 0.29
RTN1-209ENST00000611068 TTC8Q8TAM2 541 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 SEMA4DQ92854 862 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 PACSIN1Q9BY11 444 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 C17orf75Q9HAS0 396 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 ETNK1Q9HBU6 452 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 INTS9Q9NV88 658 aaKnown RBP16.87■□□□□ 0.29
RTN1-209ENST00000611068 ETNK2Q9NVF9 386 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 SMIM23A6NLE4 172 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 CALCAP01258 141 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 MAPK4P31152 587 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 GJA8P48165 433 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 CRHR2Q13324 411 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 DRAP1Q14919 205 aaPredicted RBP16.87■□□□□ 0.29
RTN1-209ENST00000611068 PTPROQ16827 1216 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 CEP128Q6ZU80 1094 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 TMC3Q7Z5M5 1100 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 GBP5Q96PP8 586 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 ARHGAP39Q9C0H5 1083 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
RTN1-209ENST00000611068 FGFR1OP2Q9NVK5 253 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 NMRK1Q9NWW6 199 aa16.87■□□□□ 0.29
RTN1-209ENST00000611068 PLXNA1Q9UIW2 1896 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 B4GALT5O43286 388 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 VTNP04004 478 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 GSTA2P09210 222 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 HNRNPH3P31942 346 aaKnown RBP16.86■□□□□ 0.29
RTN1-209ENST00000611068 MMP13P45452 471 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 IFI35P80217 286 aaPredicted RBP16.86■□□□□ 0.29
RTN1-209ENST00000611068 TMEM132AQ24JP5 1023 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 RASIP1Q5U651 963 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 ZNF571Q7Z3V5 609 aaPredicted RBP16.86■□□□□ 0.29
RTN1-209ENST00000611068 IRF2BP2Q7Z5L9 587 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 TMEM130Q8N3G9 435 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 RMDN2Q96LZ7 410 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 DDX50Q9BQ39 737 aaKnown RBP16.86■□□□□ 0.29
RTN1-209ENST00000611068 TUBGCP4Q9UGJ1 667 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 SUN2Q9UH99 717 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 USH1CQ9Y6N9 552 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 E7ENQ6 273 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 INO80B-WBP1J3KQ70 363 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 CAPN15O75808 1086 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 KLRC1P26715 233 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 MAGEA1P43355 309 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 NAMPTP43490 491 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 SESN3P58005 492 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 PLPPR4Q7Z2D5 763 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 ANKLE1Q8NAG6 615 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 OR6J1Q8NGC5 347 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 ZNF333Q96JL9 665 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 INO80BQ9C086 356 aaPredicted RBP16.86■□□□□ 0.29
RTN1-209ENST00000611068 SEPT11Q9NVA2 429 aaKnown RBP16.86■□□□□ 0.29
RTN1-209ENST00000611068 ERAP1Q9NZ08 941 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 SPATA7Q9P0W8 599 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 CHMP2BQ9UQN3 213 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 GMEB1Q9Y692 573 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 EVPLQ92817 2033 aa16.86■□□□□ 0.29
RTN1-209ENST00000611068 DAPK3O43293 454 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 SERPING1P05155 500 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 CTGFP29279 349 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 TNFSF9P41273 254 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 BTG3Q14201 252 aaPredicted RBP16.85■□□□□ 0.29
RTN1-209ENST00000611068 BRDTQ58F21 947 aaPredicted RBP16.85■□□□□ 0.29
RTN1-209ENST00000611068 GPD1LQ8N335 351 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 PSPC1Q8WXF1 523 aaKnown RBP16.85■□□□□ 0.29
RTN1-209ENST00000611068 MSTO1Q9BUK6 570 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 VCX3BQ9H321 246 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 MINDY3Q9H8M7 445 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 VCX3AQ9NNX9 186 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 VTA1Q9NP79 307 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 HSFX1Q9UBD0 423 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 AGO2Q9UKV8 859 aaKnown RBP16.85■□□□□ 0.29
RTN1-209ENST00000611068 TLDC2A0PJX2 215 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 SIGLEC16A6NMB1 481 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 FOXN3O00409 490 aaPredicted RBP16.85■□□□□ 0.29
RTN1-209ENST00000611068 MXI1P50539 228 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 CUL1Q13616 776 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 SESTD1Q86VW0 696 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 USP38Q8NB14 1042 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 LMO3Q8TAP4 145 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 TAS1R2Q8TE23 839 aa16.85■□□□□ 0.29
RTN1-209ENST00000611068 MANSC4A6NHS7 340 aaPredicted RBP16.84■□□□□ 0.29
RTN1-209ENST00000611068 ADCY3O60266 1144 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 PALMO75781 387 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 TMCC1O94876 653 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 TNNI1P19237 187 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 TNNC1P63316 161 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 BEX3Q00994 111 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 CYP24A1Q07973 514 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 RBBP8NLQ8NC74 664 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms